Gene Dde_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1623 
Symbol 
ID3756620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1672489 
End bp1673559 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID637782502 
Productiron(III) dicitrate transport system permease protein 
Protein accessionYP_388115 
Protein GI78356666 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0877318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTC ATGACGGAAA GGTTCCCGAA GAGTACCGCC GGTATATATG GGCCAAGGTT 
GTGTTTCTGT GTGGTGTTTC TGCAGCGCTG CTGGCAGCGC TGGTTGTCTC CGTCAGCTCA
GGGGCGGCGG ATATCCCGCT GGGTTCTGTT GTCCGCAGCC TTGCCGGACT GGGAGCCGAT
GCCCGCACCG AGGCCATAAT CTGGAACATC CGCCTGCCGC AGGCTCTTTC CGCCATTGTG
GCCGGAGCGG GGCTGGCTGT GGCAGGTGCG GCCATGCAGG CCATATTGCG CAACCCGCTC
GGGTCACCGT TCACGCTGGG TATTTCGCAT GCGGCGGCCT TTGGCGCGGC TTTTTCGGTA
ATGGTGCTCG GCGGCGGGGC CATGACATCC ACAGCCGCGG GTGCCGTCAG TGTCACTTCG
CCGCTGATGA CGACAGCGGC GGCCTTTGCA TGCAGCCTTT CCGCTGCGCT GGTCATTATC
GCTGTTTCCC GTCTGCGCGG GGCTTCTCCC GAAACCATGG TCTTGACCGG CGTTGCGTTG
GGAGCTCTTT TTACCGCGGG AACCATGTTT CTGCAGTTTT TCGCTGACGA TGTGCAGCTT
GCGGCCATCG TGTTCTGGAC ATTTGGCGAT ACGGCACGGG CCACGTGGAC AGAGCTGGCG
GTTCTGGCCC TGACAACGGC GGCATGCAGT GTATATTTTT TATCCAACGT ATGGAATTAC
AACGCCATAG ATGCCGGAGA CGAAACTGCC ATGGGGCTGG GAGTACGCGT GGGCAGGGTG
CGGCTGACAG GCATGCTTGT GGCCAGTCTG CTGACGGCGG TCATCATAGC GTTTCTGGGA
ATCATCGGCT TTGTGGGGCT GGTGGTGCCG CATATGGTCA GACGTGTCAT AGGGGCCGAT
CACCGTTTTC TGTTGCCTGC ATCCGTGGCG GGCGGCGCGC TGATTCTGCT GGTTTCCGAC
ACTGCGGCCC GGCTGATTCT GGCGCCGCAT GTTCTTCCGG TATCGGTACT TACCTCATTC
ATGGGGGCAC CGGTGTTTAT CTGGCTGATT GTCAGGGGGC GTAAAGTCTA G
 
Protein sequence
MHFHDGKVPE EYRRYIWAKV VFLCGVSAAL LAALVVSVSS GAADIPLGSV VRSLAGLGAD 
ARTEAIIWNI RLPQALSAIV AGAGLAVAGA AMQAILRNPL GSPFTLGISH AAAFGAAFSV
MVLGGGAMTS TAAGAVSVTS PLMTTAAAFA CSLSAALVII AVSRLRGASP ETMVLTGVAL
GALFTAGTMF LQFFADDVQL AAIVFWTFGD TARATWTELA VLALTTAACS VYFLSNVWNY
NAIDAGDETA MGLGVRVGRV RLTGMLVASL LTAVIIAFLG IIGFVGLVVP HMVRRVIGAD
HRFLLPASVA GGALILLVSD TAARLILAPH VLPVSVLTSF MGAPVFIWLI VRGRKV