Gene Dde_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1593 
Symbol 
ID3754999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1621563 
End bp1622687 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content56% 
IMG OID637782471 
Producthypothetical protein 
Protein accessionYP_388085 
Protein GI78356636 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.571552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTA TTGTTGGCGT TAAGTTCCGT GAATACGGAC AGATATATTA TTTTGACCGC 
GCCGGTCTTG AGCTGCAGCC CGGAGACAAT GTTGTTGTCA GCACCGAGCA GGGCGAAGGA
CTGGGCGAGG TGGTAACGCT GCGCGATGAC CTGCCCGAAG ATGCCGAAAC CACCGAATTG
AAGCCGGTGG AAAGGTTGGC AGGTTCAGAA GATCTGAGCG CGGCGGAAGA AAATGCCGGA
CTGGAGCGTG AAGCCGCGGC ATATTGCAAC GAATGCATAC GCAGCCTCGG GCTGGATATG
AAGCTTGTGG ATGTGGAGGT TTTTTTCGAC CGCAGCAAGA TAGTTTTTTA TTTTACAGCT
CCCACACGCA TAGACTTTCG TGAACTGGTC AAGGAACTGG TTAAAAACTA TCGCACCCGT
ATCGAGCTGC GGCAGATAGG CGTTCGCCAT GAAACCCAGA TGATCGGCGC GGTGGGCAAC
TGCGGTATGG TCTGCTGCTG CCGTCGCTTT CTGCGCAAGT TTGCACCTGT CACCATCAAG
ATGGCGAAAG AACAGAATCT TTTTCTTAAT CCTGCCAAAA TTTCGGGCAT TTGCGGACGC
CTGTTGTGCT GCCTGAGCTA TGAGCAGGAA AACTATGAAG ATTTTCACCG CCGTTGCCCC
AAGCTTGGTA AAAAATACCA GACTGATGAA GGCGGAGCAA AAGTGTTGCG GGCCAACATG
TTCCGCAACA GTGTAACTGT GCTGCGTGAG GGGGGCGAAG AAGCAGAAAT TTCGCTTGAT
GACTGGCGTG AGATCAATCC GCACAGGCCG GATGCTCCCC AGCCGCAGAA GCAGCCGCAG
CCCGAAAAGG CGGCACGTCC CGCACCGGAA GAAGCTGCCC CGGCGGGTGA GCCTGCTGCG
CCTGTTCAGA CGGCTGAAGC TCCTCAGGCT GCCGTTGCCC CGCAGCCTGC TGACGCAGCG
CCTGCGGCAC CTTCCGAGCC TGCCGCTGAT GACAAGACGG CCAAGCAGGC CGAACGCCGT
AAAAGTCAGG TAAAGAGCGC CGACGGTACA TCACGCCGGA CCACCCGCGG CAAGCGTAAA
CGCAAACGCC GTACCAGAAC CGACGAATAC GATCAGAACG ACTAA
 
Protein sequence
MSSIVGVKFR EYGQIYYFDR AGLELQPGDN VVVSTEQGEG LGEVVTLRDD LPEDAETTEL 
KPVERLAGSE DLSAAEENAG LEREAAAYCN ECIRSLGLDM KLVDVEVFFD RSKIVFYFTA
PTRIDFRELV KELVKNYRTR IELRQIGVRH ETQMIGAVGN CGMVCCCRRF LRKFAPVTIK
MAKEQNLFLN PAKISGICGR LLCCLSYEQE NYEDFHRRCP KLGKKYQTDE GGAKVLRANM
FRNSVTVLRE GGEEAEISLD DWREINPHRP DAPQPQKQPQ PEKAARPAPE EAAPAGEPAA
PVQTAEAPQA AVAPQPADAA PAAPSEPAAD DKTAKQAERR KSQVKSADGT SRRTTRGKRK
RKRRTRTDEY DQND