Gene Dde_1545 details

Gene Information

• Locus tag: Dde_1545
• ID: 3755984
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 1564065
• End bp: 1564565
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637782422
• Product: single-strand binding protein
• Protein accession: YP_388037
• Protein GI: 78356588
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00898888
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTTA ATAAAGTTAT GCTCATAGGC AGGCTGGGTG CCGACCCCGA GCTTAAATAT 
TCCCAATCAG GAACCCCTGT TGCGCGTATG CGCATTGCCA CCAGCGAAAC CTATACGGAC 
CGCGAAGGCA ACCGGCAGGA AAGCACGGAG TGGCATACCG TGGTTGTGTT CCAGCGTCAG 
GCCGAAAACT GCGCCAACTA CCTTTCCAAA GGCAGCATGG TGTATGTGGA AGGCAGCCTG 
CAGACAAGAC AGTGGCAGGA TCAGCAGGGA CAGAACAGAT ACACCACCGA GATCAAGGGC 
CAGCGCGTCC AGTTTCTTGA CAGAAAAGGC GATGGTCCCG GTGCGCCTGC ACAGGGCGGC 
GGTGAGCGCC GTTCTTTCCA GCAGCCGCAG CAGTCACAGC AGCGTGGCGG CCGTCAGGCT 
CCTCCTGCCG ATGACGGATT CGATGATCTC GGTCCGGCAT TTCCGTCGGA AGTCAGCGGA 
ATGGACGACG TGCCGTTCTA G 

 

Protein sequence

MSLNKVMLIG RLGADPELKY SQSGTPVARM RIATSETYTD REGNRQESTE WHTVVVFQRQ 
AENCANYLSK GSMVYVEGSL QTRQWQDQQG QNRYTTEIKG QRVQFLDRKG DGPGAPAQGG 
GERRSFQQPQ QSQQRGGRQA PPADDGFDDL GPAFPSEVSG MDDVPF