| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1534 |
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| Symbol | |
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| ID | 3756012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1553394 |
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| End bp | 1555283 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637782411 |
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| Product | polymerase |
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| Protein accession | YP_388026 |
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| Protein GI | 78356577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.451593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGC GAAACGCAAG CATATCCATA GCCATATCCG AAGACGGTCT TTCGGCCGTC
ATTTCCGACT GGTCTGCGGC GCAGGAAGGC GGTGCGCTGA TTTCTTCTTC GGGCCTCAAT
GACGCACTAC GGCAGGCGGG CGTCATCACG CCCCCGCTCG TGGGCGTGCT GACCAAGATA
AACACGGTGC TGAAAAAAGG GGAAGACCCG CGCGGCATAA CAGTAGCCCG AGGCACCCTG
CCGGAACCCG CCAAAGACGC AGCACTGCAG CCTGCGGGCG ATTTCCGCAT GCCTGTCTTT
CCCGGCGACG TCATAGGCAC CATCACGCCC GCACGCAGCG CAGTCCCGGG CAAAGGGGTC
AACGGCACCG TAGTCAAATC TGAAGGCCCC GAGAAAGGGC AGGAAATTAG TTTTGCCGAA
GATTGCGGCT GTCATCTGGA CACGACGACA CTGCAGGTGC GCGCTTCGCG CTACGGCATT
ATCGGCATCA CCAGAAACCG CATACACATG CGGCCGCTCA TAGCCGTGCC CCCCGACGCC
ATGGTAGCCA TGGGCAGTGT GTTCGCCAGG GATTTCAAAG GGCGGGAAGT CACCCCCCTG
CAGATGGAAA GCGCGCTGAA GGCGGAAGAC ATCACCCAGC CGCTTGAAAC GGCCGTGCTG
CAGGCCGCAC TTAAAAACGC ACAAAAAAGC AACGCAGAAA TTCCGAACGT GCCGCTAAGC
CGCGGCGTGC AGCCCCAAAG CGGTAAAGAC GGCTGGTTTG AGCTTTACAT CAAGGACGAA
CGGTCCAGCA TCGGCATAGA AGCGGCTGAC GGAAGCATAG ACTTCCGTGC ACGCGGAATG
ATCAAAGCCG TAACCAGCGG CACAAAGCTG GGCAAACTGC ACGCCCCCAC CAGAGGACGC
CCCGGCAAAG ATGTTTTCGG CAAGCTTATT CCCGCACACG ACGGCGCTGT TTTTCTGCTG
CAGACGGGCG AACATGTGGA CGCGCTGGAA GGCAGCGAGT TTGCCGCCGC CATCGAAGGC
ATGGTCATAT ACAAAAACAA CAGCCTGTCC GTAAGCGAAG TGTTTCAGAC CCGCGGCGAT
CTGAATATGA GCGTGGGTAA TATCAGTCTG GAAAAAGGTT CCGCCCATAT CCGCGGTGCC
GTGCTGGCCG GATTCCGCGT AAGCGCACCG CGCCATGTGC GCGTGGACGA CATAGTGGAA
AACGCGGAAA TAGAATGCGG CGGCGATGTG GAAATAGGCG CGGGCATTCT GATGGACCGT
ACAGGGTTCA TCAAAGCGGG CGGCACCATA TCGGCGACCT TTGCCAAAGG TGCCCGGCTG
GAATCAGGGG CGGACATTAT AATAGCGCAC GAACTGTCGA ACTGCACCGT CTTTGCCGCA
GGCAGCGTTG AAGCTGTCAA AGGGCGCGGC AAAATAGTCG GCGGTGAAGT GCACGCGGTA
AAAAACATTC TGGCAAATGA AGTCGGGTCT GATCTGGGTG TGCTCACTAC CATTATTCTG
GGCACGGAAC CCCAACCCAA AGACAATACC CGCAGCGCCC GGCGCAAAGA ACTGAACAGC
CTTATAGAGC GCATTGACGC GGGCCTCGGT CAACGGGATC TGCGCACCCT GCTCGAACAG
ACCCCGCCGG AAAAACGCCC CGCCGTGGCA TCTGTCATCA AGACGCGCAT TGCCGCGCAG
GAAGAGCTGC GGGCACTGGA TGAAGAGGAA AAACAGGAAA AGGAACGGCT GCTCAACGCC
CCCAAACCCA GACTCAAGGT GCTGAAGACG CTTTACCCCG GCACCAGCAT CAAAGCCGGC
GGGCTGACCC TGTGCATCAC CGACCCTGTA CCCTACAGTC AGATATACTT TGACCCGCAG
GCCGGAGAAA TAGTCATAGC GTCGCTGTAG
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| Protein sequence | MSMRNASISI AISEDGLSAV ISDWSAAQEG GALISSSGLN DALRQAGVIT PPLVGVLTKI
NTVLKKGEDP RGITVARGTL PEPAKDAALQ PAGDFRMPVF PGDVIGTITP ARSAVPGKGV
NGTVVKSEGP EKGQEISFAE DCGCHLDTTT LQVRASRYGI IGITRNRIHM RPLIAVPPDA
MVAMGSVFAR DFKGREVTPL QMESALKAED ITQPLETAVL QAALKNAQKS NAEIPNVPLS
RGVQPQSGKD GWFELYIKDE RSSIGIEAAD GSIDFRARGM IKAVTSGTKL GKLHAPTRGR
PGKDVFGKLI PAHDGAVFLL QTGEHVDALE GSEFAAAIEG MVIYKNNSLS VSEVFQTRGD
LNMSVGNISL EKGSAHIRGA VLAGFRVSAP RHVRVDDIVE NAEIECGGDV EIGAGILMDR
TGFIKAGGTI SATFAKGARL ESGADIIIAH ELSNCTVFAA GSVEAVKGRG KIVGGEVHAV
KNILANEVGS DLGVLTTIIL GTEPQPKDNT RSARRKELNS LIERIDAGLG QRDLRTLLEQ
TPPEKRPAVA SVIKTRIAAQ EELRALDEEE KQEKERLLNA PKPRLKVLKT LYPGTSIKAG
GLTLCITDPV PYSQIYFDPQ AGEIVIASL
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