| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1482 |
|---|
| Symbol | |
|---|
| ID | 3756074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 1500816 |
|---|
| End bp | 1501850 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637782360 |
|---|
| Product | heptosyltransferase family protein |
|---|
| Protein accession | YP_387976 |
|---|
| Protein GI | 78356527 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000479014 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCA TAGCCGTCTG GAACACCGCT TTTCTCGGCG ATGCCGTGCT GACGCTGCCG
CTTATCAGCA CGCTGAAGGC TGCCTATCCT GATGCCGCCA TTGATTTCTG GGTGCGCAAG
GGGTTTGAGG GGCTGTTCGC ATCCCAGCCG GAGCTGGCGG GGGTGTACGG GTATGACAAG
AATGGAGCAC AGGGCGGTCC GGGCGGAACT TTCGCTCTGG GCAGGCATAT GGCGGCACAG
GGGTATTCGC TTTTTGTATC GGCCCATACC AGTGTCCGCA GCGGCCTGAT GGCCCGCTGG
TCAAGCGCCA AGACGCGTAT CGGGTATGAC AGACCTTTTC TGAACAGATA TTTTTATACG
CATACCGTTC CGCGCTGCTT CGACTCCATG GAAGAAATCG AACGCCTGCT GCAACTGGTA
AAGCCACTGG GAATCAGCGA ACTGCACACA TGGCCCCGGC TGGTGCTGCC GCAGGATGCC
CGCCATAAAG CCGAAGGATA TTTTGCCAGC CATGTGAAAG GTCCGGTTGT GGGGCTGCAT
CCCGGTTCGG TATGGGGAAC AAAACGATGG CCTGCCGCCT CGTATGCGCA GGTTGCTTCG
CACGCAGTTG CCGCGGGGGC GCAGGTGATG ATTTTTGCCG GTCCCGGAGA AGAAGCCATG
GCGCAGGATG TGATCAGCCG CATTGATACC GGGGGCAGAC GCCACGCTGT GCTTGATCTT
TCGGGCAGTC TTTCGCTTCC CGAGCTTGCG GCCTTTCTGG GACGTCTGGA CTGTTATGTG
ACCAATGATT CAGGCCCCAT GCATCTTGCA TGGGTTCAGC ATACTCCGGT GACGGCCATT
TTCGGCCCTA CCGTCCGGCG TCTGGGTTTT TTCCCCCGCG GCAGCCGGTC CACGGTGCTG
GAGGCCGATG TCTCCTGTCG TCCGTGCGGC CTGCATGGCC CGCAGGAATG CCCGCAGGGG
CACCACCGCT GTATGGCTGA GGTGACTCCC GGCATGGTCT GGGCGGATGT GGAGCGCAAG
CTTTTCCGCA CATGA
|
|---|
| Protein sequence | MRRIAVWNTA FLGDAVLTLP LISTLKAAYP DAAIDFWVRK GFEGLFASQP ELAGVYGYDK
NGAQGGPGGT FALGRHMAAQ GYSLFVSAHT SVRSGLMARW SSAKTRIGYD RPFLNRYFYT
HTVPRCFDSM EEIERLLQLV KPLGISELHT WPRLVLPQDA RHKAEGYFAS HVKGPVVGLH
PGSVWGTKRW PAASYAQVAS HAVAAGAQVM IFAGPGEEAM AQDVISRIDT GGRRHAVLDL
SGSLSLPELA AFLGRLDCYV TNDSGPMHLA WVQHTPVTAI FGPTVRRLGF FPRGSRSTVL
EADVSCRPCG LHGPQECPQG HHRCMAEVTP GMVWADVERK LFRT
|
|---|
| |