Gene Dde_1379 details

Gene Information

• Locus tag: Dde_1379
• Symbol: thiE
• ID: 3756166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio desulfuricans subsp. desulfuricans str. G20
• Kingdom: Bacteria
• Replicon accession: NC_007519
• Strand: +
• Start bp: 1397914
• End bp: 1398561
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637782257
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_387873
• Protein GI: 78356424
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000146383
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCCGG ATTATTCGGT TTATCTGGTC ACTGACCGTA CGCTGTGTGT CAGTGGTACG 
CTGGAAGATG TGGTGGCCCG TGCCGTGCAG GGCGGCGTTA CCATGGTGCA GCTGCGCGAA 
AAGCAGCTTT GTACCCGTGA GTTTGTCGAA CTTGGCAGGG CGCTGCGGGC GCTGCTGGCC 
CCCCGCGGGG TTCCGCTGCT TGTCAACGAC CGGGTGGATG TGGCTCTGGC CTGCGGGGCC 
GACGGGGTGC ATATCGGGCA GAGCGATATC CGTTATGCTG ATGCACGCAG GCTCATGGGG 
GCCGGTGCCG TCATCGGCGT GTCGGTGGAA TCCGTTGAAC AGGCTGCGGA AGCGGAACGT 
TGCGGCGCCG ACTATATGGG CGTGAGCCCC GTATTTGCCA CCCCCACAAA AACAGACACT 
TCCGCGCCGT GGGGGCTGGA AGGGCTGCGC GGTCTGCGGC GGCGGTTTTC TTTGCCGCTG 
GTGGCCATAG GCGGTATCGG TCCGGATAAT GCGGCTGAGG TTTTTGAAGC GGGAGCAGAC 
GGCATTGCTG TTGTTTCTGC CATTTGCGCC AGTCCGGACC CGCAGCAGGC GGCAGCAACA 
CTGCGTGCCG TTGCCCGCGG AAAAAGGCGT GCGGCAGCCG TTTTATGA 

 

Protein sequence

MQPDYSVYLV TDRTLCVSGT LEDVVARAVQ GGVTMVQLRE KQLCTREFVE LGRALRALLA 
PRGVPLLVND RVDVALACGA DGVHIGQSDI RYADARRLMG AGAVIGVSVE SVEQAAEAER 
CGADYMGVSP VFATPTKTDT SAPWGLEGLR GLRRRFSLPL VAIGGIGPDN AAEVFEAGAD 
GIAVVSAICA SPDPQQAAAT LRAVARGKRR AAAVL