Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1366 |
Symbol | |
ID | 3756190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1385066 |
End bp | 1386292 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637782246 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_387862 |
Protein GI | 78356413 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.217764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTTG AGCTGTTTGT TGCGTTGCGT TATCTGTTTG CCCGCCGCAA GCAGACTTTC ATTTCGGTCA TATCCGTCAT TTCGGTGCTG GGTGTGGCTC TGGGCGTGGC ATCGCTCATC GTGGTGCTGG GCGTTATGAA CGGCTTCACC GTGGATATGC GTGAAAAGAT ACTGGGCGTG AACGCCCATG TCATCACGCT GGCTGCGGGC GGCGGTATTT CCGGCTATCC TGAACTGGTG CGCAAGGCCG AAACCGTTCC GGGAGTAAAG GGCGCGACCC CGTTCATTTA TTCCGAGGTC ATGCTTTCGA CCCGCTACGG AGTCAAAGGT GTGGTGCTGC GCGGGGTGGA CCCCGTTTCG GCGCCGGCGG TGCTGGGCAT TGCCGGCCGC ATGGTAGACG GTTCTCTGGC CGACCTTGAA CGATCCGGTG CGCCGGGTCT TGTCATCGGT AAAGAACTGG CCAAACGGCT GGGTATCACC GTGGGCAGCA GGGTCAACCT GCTGTCTCCT TCGGGCGAAA AAACAAGCGC GGGGTTTACC CCGCGCATCC TTTCTTTCAA GATCGCAGGT ATTTTTTCTA CCGGCATGTT CGAGTATGAC TCGTCGCTGG GGTTCGTCTC GCTTGATGCC GCCCGTGATC TGCTGGGAAT GCCTGCTGGC ACTGTTTCTG GTCTTGAAAT AGTGGTGGAT GACATTTACC GCGCCGATAC CGTGGCGCAG GCGGTTACTC AGGCTCTGGG CGGGTATCCT TTTTACAGCC GCAACTGGAT GGAAATGAAT GCCAACCTTT TTGCGGCGCT CAAGCTGGAA AAAGCTGCCA TGTCCATCAT GCTCACCCTC ATAGTGCTGG TGGGGTCTTT TTCCATTGTC ACCACACTGG TGATGCTGGT TATGGAAAAA TCGCGCGATA TCGCCATCAT GATGTCCATG GGCGCTACAA AATCACATAT CCGGCGCATT TTCATGCTGC AGGGTACTAT CATAGGCGTT GTGGGCACCA CTCTGGGATT CGGGCTGGGG CTGCTTGTGT GCTGGCTGCT CAAGCGTTAT CAGTTCATCA AACTGCCGCC CGGCGTCTAT TCGCTTGACC ATCTGCCCGT GCTGCTGCAG TGGCAGGATC TGGCAGCCAT TGCCGTCGGT GCCATGGTGC TGTGCTTTCT TGCCACCATC TATCCTGCGC GGCAGGCGTC TTCACTGGAG CCTGCCGAGG CGCTGCGGTA CGAATGA
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Protein sequence | MRFELFVALR YLFARRKQTF ISVISVISVL GVALGVASLI VVLGVMNGFT VDMREKILGV NAHVITLAAG GGISGYPELV RKAETVPGVK GATPFIYSEV MLSTRYGVKG VVLRGVDPVS APAVLGIAGR MVDGSLADLE RSGAPGLVIG KELAKRLGIT VGSRVNLLSP SGEKTSAGFT PRILSFKIAG IFSTGMFEYD SSLGFVSLDA ARDLLGMPAG TVSGLEIVVD DIYRADTVAQ AVTQALGGYP FYSRNWMEMN ANLFAALKLE KAAMSIMLTL IVLVGSFSIV TTLVMLVMEK SRDIAIMMSM GATKSHIRRI FMLQGTIIGV VGTTLGFGLG LLVCWLLKRY QFIKLPPGVY SLDHLPVLLQ WQDLAAIAVG AMVLCFLATI YPARQASSLE PAEALRYE
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