| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1360 |
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| Symbol | |
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| ID | 3756182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1376596 |
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| End bp | 1379520 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637782238 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_387856 |
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| Protein GI | 78356407 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACG CGATGGAAAA TGAAGTCGAG CTGCTGAAAA AGCAGATTGT CGAACTGCAA
CGCGAAAATG AGATTCTGAA GTCAGGGAAT GTCTTTACAG GCAGCTCCAG AGAACACGAT
CTTCTTCTGC GGCTTTTTGA TAGCGTGAAA GAGTATGTAT ATGTTGCAGA TATGGAAACA
TATGAACTGC TGTACGTTAA CAGGACGCTT GAGAAAGATA TCGGTCCGTG CACCGGTAAA
AAGTGCTACC AGTTTTTACA GGGACTTGAA GAACCATGTC CTTTCTGTAC AAACGATATA
ATACGTAACG ATCCTGATTC ATCACATATA TGGGAGCTGT ATAACCCTGT ACTGAAGCGT
TGGTACAGAT GCATCGACAG GGCCATACCA TGGGTGGGCA ACAGGCTGGT CCGGTACGAA
CTGGCTCTGG ATATATCAGA CATCCGTACT GCGGAAGAGG AAATGCGGCG GTTCCGCATG
GCGCTGGAGG CCTCGTCGGA TGCGGTATAC CTGACAGATC TGCGGACGGG ACTCTTTGTG
GATGTGAACA GCCGGGCGTA CACTCAGCTT GGCTATACGC GTGAAGAAAT TCTGGGCATG
CGTCCGGAGG ACATCAATAT AGCAGTAAGC GAACACGGTC TGGAGCCGTA CCTGCGTAAC
GTGCTTGACG GCAGGGACGA AGGGGCTGTG GAAACGTATC ACCGGCACAA GGACGGCACT
CTGCTGCCCG TGGAGGTGGG ACTGCGCAGG CTGACCACCG TTTCCTCGGA ACTGCTGGTC
TCGGTGGCGC GTGATATCAG CGAACGTCGC GACGCCCAGC GCGATCTGGC CACGCGGCTC
ATGTACGAAA GAGTGCTTTC CACCTGTGCG CGCGAACTGC TTTCGCAGTT CAGTTCGCTT
AACGCCATGC ACACCACACT GGAAAGCCTG CGTGAAACGG TGGACGTGTG CCGCGTTTAT
ATCTTTGAAA ATTTTATAAA TGACGACGGA CAGCTGTGTT GCCGCCACCG TTTTGAGGTC
TGCTCCGAGG GGGTTGCCTC GCAGTTCGGC AAATCAGAAC TGGAATGCGT GCCCTATCTG
CCGGCTTTCA GCCGCTGGGC GCAGACTCTG GAGCAGGGTA AGGCGCTGAG CGGGCTTGTG
GATGAATTTC CGGAAGAGGA ACAGCCGTTG CTGCGGGCGC AGGACATCCA GTCCATTCTT
GTGCTGCCGC TGAAGGTCGG CGGGCAGTGG TGGGGGCTGA TCGGGTTTGA CGACACACGC
ACCATGCGCC GCTGGACGCA GCTGGACGAA CAGCTGCTCA TGACCGCGGC AGAAATCATC
GCGGCTGCCA TAGAGCGTAA CAGAGCGCAG AAGCAGCTTG AGAAGACCTC GCGTGAAGCG
GAAGCGGCCA GCAGATCAAA AAGCGAATTT CTTGCCAATA TGAGCCATGA AATCCGCACA
CCGCTTAACG CCATCATCGG CCTTACCGAG CTTTCGCTGC AGGAGGATCT GCCCGAAGGC
GTCGGGGAAA ACCTCAGGGC TTCACTGTCG TCTGCCGAGG CGCTGCTGGA TATTGTTAAC
GATATACTGG ACCTTGCCCG TGTTGAGTCT GGTAAGCTGC ATCTTGAGGA AGTGGAGTTC
AGCCTGCCCC GTTTCCTCGG CGGGGTCATG CGCGTTATGC GGCATGAAGC CGAACGTAAG
GGCCTTGATT TTTCGATGTT TCTTGGCAGG GGGTTGCCCC GCGAGCTGAT GGGCGATTCC
GGAAGACTGC GTCAGATTCT GGTGAATCTT ATCGGCAACG CCATCAAATT CACGGAAGAA
GGCGGCGTCA ACGTTGCTGT GGAATGTGTT TCCTCTTCCG GTGGTTACAT AGCCGGTGTA
CAGCGTGTAC GCTTTACTGT GCAGGACACG GGCATAGGGA TTCCGGAGCA CCTGCACGGC
ATCATATTCG AAAACTTCCG TCAGGCGGAC GGGTCCATAA CACGCAAATA TGGCGGCACA
GGGCTAGGAC TGACCATCAG CAGGCAGCTT GTCGAGATGA TGGGCGGCAG TATTTCTCTG
CGCAGCGAAG CCGGAAAGGG CAGCCGTTTT GAGGTGGAAC TGCCCTTTAA AGTGGCCGAG
ACGCATGCGT GTGCCATCGA GGAAGGGGAA GATGTTCCTG AAATGCTGCC TTTGCGCATA
CTGCTGGCGG AAGATAATGC CCTGAACAGA CGCACTATGA TTCTGGCGTT GAAAAAACTT
GGTCACCAGG CGGATGCGGT GCAGAACGGT GCTGAAGCCG TGGAAAAGGC CGCGCTGAAG
CGCTATGACT GTATTTTTAT GGATGTGCAG ATGCCGGTGA TGGACGGGCT GGATGCCACA
AGGGCCATAC GCGGCTTTAC CCCTGATACG GCGGCAACGG CGCCGGATGT GCATATCATT
GCGCTGACTG CGCATGCGCT GGCAGGTGAT AAAGAGCGTT TTGTCCAGGC GGGCATGTCC
TCGTACCTTT CCAAGCCTGT GCGCCTGGAA GCGCTGAAAA AGCATCTTGT CCAGCTTCAG
GCCGGGACCG CAGACGGCGG CGGGGCCGAT GCGCCGCTTA TGCCCGCCTA TGATGCGCAT
CCTGTCATGG AACCGTACAC CGGCGGCCAG CGCGAGGCCT ACCGGTTCCG GCGTTTTCTT
GTTACAGTGG CGGCTCTGCG CGAAAGCCTG TGGTCTGCCT TTGACCGCGG CAACTTGCTG
GAACTGCACT CGCTGGCGCA TACGCTGATG CACGAAGCCG ACAAAATGGG CGCCCCCCGC
GTATGCGTGA TGGCTTCTCG GCTTGAAAGC CGTGTGCGTG ATGCGAGACC GGAAGAAGTG
CGCCCTATTT TTCTGCTGCT CATGGATGCC ATCAATCATC TGGAGCACGA ACTGCTGAAG
ATTTTTCCTG ACGCCCGCGG AGCTGAAGGC CACCATGCCG GATGA
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| Protein sequence | MDNAMENEVE LLKKQIVELQ RENEILKSGN VFTGSSREHD LLLRLFDSVK EYVYVADMET
YELLYVNRTL EKDIGPCTGK KCYQFLQGLE EPCPFCTNDI IRNDPDSSHI WELYNPVLKR
WYRCIDRAIP WVGNRLVRYE LALDISDIRT AEEEMRRFRM ALEASSDAVY LTDLRTGLFV
DVNSRAYTQL GYTREEILGM RPEDINIAVS EHGLEPYLRN VLDGRDEGAV ETYHRHKDGT
LLPVEVGLRR LTTVSSELLV SVARDISERR DAQRDLATRL MYERVLSTCA RELLSQFSSL
NAMHTTLESL RETVDVCRVY IFENFINDDG QLCCRHRFEV CSEGVASQFG KSELECVPYL
PAFSRWAQTL EQGKALSGLV DEFPEEEQPL LRAQDIQSIL VLPLKVGGQW WGLIGFDDTR
TMRRWTQLDE QLLMTAAEII AAAIERNRAQ KQLEKTSREA EAASRSKSEF LANMSHEIRT
PLNAIIGLTE LSLQEDLPEG VGENLRASLS SAEALLDIVN DILDLARVES GKLHLEEVEF
SLPRFLGGVM RVMRHEAERK GLDFSMFLGR GLPRELMGDS GRLRQILVNL IGNAIKFTEE
GGVNVAVECV SSSGGYIAGV QRVRFTVQDT GIGIPEHLHG IIFENFRQAD GSITRKYGGT
GLGLTISRQL VEMMGGSISL RSEAGKGSRF EVELPFKVAE THACAIEEGE DVPEMLPLRI
LLAEDNALNR RTMILALKKL GHQADAVQNG AEAVEKAALK RYDCIFMDVQ MPVMDGLDAT
RAIRGFTPDT AATAPDVHII ALTAHALAGD KERFVQAGMS SYLSKPVRLE ALKKHLVQLQ
AGTADGGGAD APLMPAYDAH PVMEPYTGGQ REAYRFRRFL VTVAALRESL WSAFDRGNLL
ELHSLAHTLM HEADKMGAPR VCVMASRLES RVRDARPEEV RPIFLLLMDA INHLEHELLK
IFPDARGAEG HHAG
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