Gene Dde_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1359 
Symbol 
ID3756181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1374486 
End bp1376426 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content62% 
IMG OID637782237 
ProductElongator protein 3/MiaB/NifB 
Protein accessionYP_387855 
Protein GI78356406 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATAC ATACATCCTC TGTGCCCGCC ATGCCTGCGG GCCGAACGCC CCTTGAGCAA 
CCCGAATTTT TACCCATGAC CGCAGCCGAT GTAAAACACA TAGGCTGGGA CGGCATAGAT
ATTCTGCTGG TAACCGGTGA CGGATACGTA GACCACCCCA GCTTTGCCGC AGCCATACTG
GGGCGGTGGC TTGTGGCGCA TGGCTACCGG GTGGGCGTGG CCGCCCAGCC GGCCTGGGAC
AGCACAGCCG ATCTGGAAAA AATGGGCAGA CCGGCTCTTT TTGCCGGCGT AACAGCCGGA
GCGCTCGATT CCATGCTGGC CCACTATACA GCATTTCGCA AAAAACGCTC CGACGATGCA
TATACCCCCG GCGGCAAAGC AGGAGCACGC CCCAACAGGG CGACCATAGT ATACACCAAT
CTTGTGCGGC GCGCCTTTCC CGGTCTGCCC GTAATTCTCG GAGGCATAGA GGCTTCGCTG
CGGCGCATAA CACATTACGA TTTCTGGACG GACAAACTGC GCAGACCGCT GCTGCTGGAC
AGCAAAGCCG ACGCCATAAT CTACGGCATG GGCGAACGGG CCATGCTGGA AGCGGCCGTG
GCTCTGGATG AAAACGGCTA TGCGCACCAG CAGGACACCG GAGCACTGCC GCCGCTGTGG
ACTGTTTTTT CCGCCCTGCG CGGCATGGCC TGCATGGTAC CCGCTGACTA CGCTCCGGCG
GAAGCCGATT TTTTTGAGCT GCCCGCCCAC GAAGCCATCG AAAAAGCCCC GCACCTGCTG
CTGCAGGCTA CCGTGATGCT GGAAAAGCAG GTGCACGCCA TGAACGCTCC GGCCATCCAG
CCCGCGGGAG GCCGCAAGGT ACTGCTTACG GCACCGGCCC ACCCCCTTGG TGAAGAGGAA
ATGGACCGTC TGTACTCGCT GCCCTTTGCA CGCACGGCGC ACCCTGCCTA CACCAGTCCC
ATTCCGGCAA CGGATATGAT GCTGACTTCA GTCACCACAC ACCGCGGCTG CGGGGGCGGA
TGCTCATTCT GTTCACTGGC GCTCCATCAG GGCAGGCGCA TTGCATCGCG CAGCCGCAAA
TCGGTCATCG AAGAGGTGCG GGCCATGACC CGCCGTGCAG ACTGGAAAGG CACCATAAGC
GATGTGGGCG GACCGAGCGC CAACATGTGG CAGGCCGCAT GCGCGGCCGA CCCCGCCCGC
TGCCGCAGGG AAAGCTGCAT GCACCCTTCG GTGTGCAAGG CATTCAAGGC TCAGCAGCCC
GCCGCCATTG ACCTTCTGCG CACCATACGC GGCATGGACA AAGTACGCCA TGTGCGCGTG
GCCAGCGGGG TGCGGTATGA TCTGGCGCTG AAGGATGACA CAGCGCTGCG CGCCTATACC
ATGGAATTCA CCGGCGGCCA GCTTAAAGTG GCGCCGGAAC ACATCTGTGA CAACGTACTG
GAGCGCATGC GCAAGCCCGG ACTTCCCGCC TTTGAAGCCT TTCTCGAAGC TTTTGAAACT
TTCTCGCGTG AAGCCGGTAA AGAGCAATAT GTCATTCCCT ACCTTATGAG TGCGTTTCCC
GGCTGCACGG ACGACGACAT GCGCACACTG GGCCGCTGGC TGCGTCAGCG CGGCTGGCAG
CCCCAGCAGG TGCAGTGTTT CATACCCACG CCCGGAACAG TGGCCACCGC CATGTACTAT
GCCGGTATCG ACCTGCAGGG AGACCCCATA TATGTCGCCC GCACCGATGC CGAACGTCTG
CGCCAGCACC ACATACTCAT TCCCTCCCAC GGGGGGGCAC AGGGCGCTGC CGGCAAAAAG
CACGGGCAAC AGCGAAAAAA CGTCCCCCGC CATGCCGCCG GAAAACAGCA GGCTGCACAG
CAGACCCGGC GGGACGACGA CCGCAGATCC CGCGGTCGCA GCAGCGCGCG CCCCTCACGG
CCGCAGCGCA GAAGGGGCTG A
 
Protein sequence
MRIHTSSVPA MPAGRTPLEQ PEFLPMTAAD VKHIGWDGID ILLVTGDGYV DHPSFAAAIL 
GRWLVAHGYR VGVAAQPAWD STADLEKMGR PALFAGVTAG ALDSMLAHYT AFRKKRSDDA
YTPGGKAGAR PNRATIVYTN LVRRAFPGLP VILGGIEASL RRITHYDFWT DKLRRPLLLD
SKADAIIYGM GERAMLEAAV ALDENGYAHQ QDTGALPPLW TVFSALRGMA CMVPADYAPA
EADFFELPAH EAIEKAPHLL LQATVMLEKQ VHAMNAPAIQ PAGGRKVLLT APAHPLGEEE
MDRLYSLPFA RTAHPAYTSP IPATDMMLTS VTTHRGCGGG CSFCSLALHQ GRRIASRSRK
SVIEEVRAMT RRADWKGTIS DVGGPSANMW QAACAADPAR CRRESCMHPS VCKAFKAQQP
AAIDLLRTIR GMDKVRHVRV ASGVRYDLAL KDDTALRAYT MEFTGGQLKV APEHICDNVL
ERMRKPGLPA FEAFLEAFET FSREAGKEQY VIPYLMSAFP GCTDDDMRTL GRWLRQRGWQ
PQQVQCFIPT PGTVATAMYY AGIDLQGDPI YVARTDAERL RQHHILIPSH GGAQGAAGKK
HGQQRKNVPR HAAGKQQAAQ QTRRDDDRRS RGRSSARPSR PQRRRG