| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1340 |
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| Symbol | |
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| ID | 3756199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 1358410 |
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| End bp | 1359684 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637782218 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_387836 |
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| Protein GI | 78356387 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCCAAC ACCCAACACA CGGCACCTAT ATGCGCAAAT TCATAGTCAT TTCCCTGATG
CTTGTCTGTA CGGCAGCCGC CGGCGGCTGG TTTTTCATAA ACAAAAAAAC AGGGCACGCC
GTTGTGATCA CCCGCACGCA GGAACTGCGT CCGGGCACCA TACGCGAAGT GCTTGAAGCC
ACCGGCATCA TCAAGCCAGA AGTGGGAGCC ATTGTAAAAA CAGGCACCCG CGCCACAGGA
CTCATCCGCA AAATGTACGT CCGGGTGGGC GACAGTGTGC AGAAAGGCGA CCTCATTGCC
GAAATAGATG ACAGAGAGCA GCAGGCTTCA TTAAACGAAG CCAGTGCCAA TGTGGAAAAA
AGCAAAGCGG AACTGCGGCA GATCGAACTT TCGTACCCGC TGCGCATTGA CGAAGCCGCA
GCCCAGCTTA AAGCGGCCAA AGCGGAACTG CGCTTTGCCG AACTGACGCT GCAGCGCACC
CAGCAGCTGG TCACCCAGCA TCTTGAAACC CAGAACAAAC TGGACGACAC CCAGCAGGCT
GCCACGGTAT CGAGCAACAC CGTGCGGGCC CGCGAAGCCA CTCTGCGCCG CCTCAGGGCG
GAATTTGAGC TGGAGCGCAC CAAAGCCCGC GAAGCGCTGC AGCAGGCTCA GGCCGGGCTG
GAGTCCGCCC GCATACGCAT GTCGTATACC ACCATATACA GTCCCATAAA CGGCATTGTC
AGCCAGGTGA CTGCACAGGA AGGCGAAACG GTTGTGGCCG GACTTGAGGT GGCAAACCTC
ATCACCGTGC TTGACCCCGA CAGGCTTGAA ATGTGGATAT ATGTCGATGA AACCGATGTG
GGTAAAGTCA GGCCCGGCAT GACGACGGAA TTCCGTGTGG ACACCTATCC CGATGCGGTG
TTCACCGGCA CCGTGGACCA GATATATCCG CAGCCGGAAG TACGTGACAA CATTGTGTAC
TATCAGGCGC TGGTCAAACT TGCACCGGAA ACATCGCGCA AGCTGCGGCC GGAAATGACC
ACGCAGTGCA GTGTCATTGT GCACGAAAAG GACAACGTGC TTGCCCTGCC CAATGCCGCG
CTTAAATGGG TAGACGGCAA ACAGACGGTG TTTGTACAGC GCGCCGCGGG CAACGTGGAA
AAAGTCTACC CGCAGCTGGG GCTGCGCGGG CTGGACGCCA GTGAAGTCGT AAGCGGGCTG
AATGCCGGAG ACATGGTGGC CGTGGATGTA GATCTGGGCA GCGCCCCTGC CGCAAAACGT
GGCGGGGCAC ACTGA
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| Protein sequence | MIQHPTHGTY MRKFIVISLM LVCTAAAGGW FFINKKTGHA VVITRTQELR PGTIREVLEA
TGIIKPEVGA IVKTGTRATG LIRKMYVRVG DSVQKGDLIA EIDDREQQAS LNEASANVEK
SKAELRQIEL SYPLRIDEAA AQLKAAKAEL RFAELTLQRT QQLVTQHLET QNKLDDTQQA
ATVSSNTVRA REATLRRLRA EFELERTKAR EALQQAQAGL ESARIRMSYT TIYSPINGIV
SQVTAQEGET VVAGLEVANL ITVLDPDRLE MWIYVDETDV GKVRPGMTTE FRVDTYPDAV
FTGTVDQIYP QPEVRDNIVY YQALVKLAPE TSRKLRPEMT TQCSVIVHEK DNVLALPNAA
LKWVDGKQTV FVQRAAGNVE KVYPQLGLRG LDASEVVSGL NAGDMVAVDV DLGSAPAAKR
GGAH
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