Gene Dde_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1322 
Symbol 
ID3756220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1340245 
End bp1342278 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content59% 
IMG OID637782200 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_387818 
Protein GI78356369 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000151423 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA AGGTAAGGCT GATTGCAGGA CTGGGTGTGC TTGTTTTTCT GACAGTTCTG 
CTGGGCGGTG TGGGTATATT CGCGCTGGAG CAGGGTAAAA AGGATCTCAG CCATCTGATA
GACGAACAGG TGGAGCTGCG TGACATGGCG GATGCCATAC GCTATGGCGC GGCGCAGCAC
CGCAGGTTTG AAAAAGACCT GTTTCTGAAC ATCGGCGACA GAGAGCGGCA ACAGCGTTAT
CTTGCCCGTT TCCGCGAGGC TTCGGCCGCG CTCGGCGCAG ATATTGAGCG TCTGGGCCGC
ATAGTTTCCG CCAGCAGTGC CATGAGCGAA CACCGGAGAC TGCCGGATGT GCTGAAACAG
GCGCACGCGG ACTATGTGCG GGCATTTGAA TCGCTGGCCG CGGAAACCAT GGATGACCCT
GACCTGACTC CGCAGGAAGC CAACAGGCGG TTCGGCTCGG CCAAGGAGCA TATCTACCTG
CTGGAAAGTA CAACAGATGA AATTGTCCGG CTGGTGACAC ACGGCCTGGA CAGTTACATT
GAGCTTATTC TCAGCCGTAA CAATACATTG CGCCTGTTGA TGATCTGCCT GACGGTGTTT
GTGGCTGCGG CGGGAGCGGG GGCGGCCCGC TGGCTGTTCC GTTCTGTGGA GGTTCCGCTC
GCGGCTGTTA TAGAACATAC GGAACAGGTG GCCGACGGCA GGCTGGATCA TCGCAGCACA
TACCGTTTTT CCGGTGAAAT GCAGACGCTT TTCGGTGCTG TGGAACGCAT GGTGCAGTCC
ATCAAAGAAC GCATTCTGCA TAATCAGGCT ATCATTAACG GTGTACCCGA TCCTATTATC
GTGACGGATG CCGGCTGTAT GATAACCTCG GTGAATGCTG CCGCACTGGA GCTTCTGGGC
AAGGATGAAA AGACGCTGGC AGGGCAGGCG CTGACTTCTG TGCTGGGGCG CGATTTTCAC
GGTGGCGAGT CTCCGGTGGA AACCATTGCC CGCAGCGGCG CAGCGGGGCA CGCCCTCACG
TTTGCCCATG CTTCGGGAGG GCAGGAGCGG TATTACCATG CGCGGGCCGT GAAGCTGGCG
GACGGCGGGG GACATGTGTA CGGCTATATG GAGGTTCTGC AGGATATCAC ATCAGTCAAG
GCGGGCGAGC TGAACGCTCT GCGTCAGTCC GAGCGTCTGG CGGGAATCGC ACGCAAGGCT
GAAGGAATTG CTGCCAATGT GGCCGAGGCT TCCGGAATTT TGGAAGAGCA GGTTACCGAG
GCTGCCCGGG GTGCCGACCA GCAGCAGCAG CGCAGTTCGG AGTCGGCCAC AGCCATGGAA
GAGATGAACG CCACGGTACG GGAAGTGGCG CAGAATGCTT CGGATACGCA TCTGATGACC
GAAGACGTGC GCCGCAAGGC GTCGCATGGT GCCGAACTGG TTGACGGCGT GGTGCGTGCG
GTGGACGGGC TGGAACGTCA GTCGCTTGAA CTGCGTACGG AAATGGAGCA GCTGGGGGCC
AAAGCGGCGG ATACAGGCAA GGTGCTGGGA GTGATAACGG ATATTGCGGA CCAGACAAAC
CTGCTCGCCC TTAATGCGGC CATAGAGGCC GCCCGTGCCG GAGATGCCGG AAGAGGGTTT
GCCGTAGTTG CCGACGAGGT GCGCAAGCTG GCGGAAAAAA CCATGCAGGC CACCGGTGAG
GTGGAGCAGG TCATCATGGG TATTCAGCAG TACACCGCGC GCAGTGTGCA GGCTACGGAA
ACCGCAGTAC GCGCCGTAAG CGAAAGCCGC GGGCTGGCCG GAGAAGCAGG ACGTATGCTG
CACGAAATAG TGGGTGCGGT GCATACTGCC AGCGATCAGG TAAATTCCAT TGCCACCGCA
GCGGAAGAAC AGGCCGCCAC CAGTGAGGAA ATTAACAGGA TAATTATGGA AGTAAATGAA
ATTTCTGATG ATACGGCACA GCGGATGGCC GAGGCGGAGC ATGCTGTGCG CAGCCTTTCC
GGCGAGGCTG CCGCTTTGCG GGCTCTCATT GATTCCATGC ATGACGAAAC CTAG
 
Protein sequence
MTIKVRLIAG LGVLVFLTVL LGGVGIFALE QGKKDLSHLI DEQVELRDMA DAIRYGAAQH 
RRFEKDLFLN IGDRERQQRY LARFREASAA LGADIERLGR IVSASSAMSE HRRLPDVLKQ
AHADYVRAFE SLAAETMDDP DLTPQEANRR FGSAKEHIYL LESTTDEIVR LVTHGLDSYI
ELILSRNNTL RLLMICLTVF VAAAGAGAAR WLFRSVEVPL AAVIEHTEQV ADGRLDHRST
YRFSGEMQTL FGAVERMVQS IKERILHNQA IINGVPDPII VTDAGCMITS VNAAALELLG
KDEKTLAGQA LTSVLGRDFH GGESPVETIA RSGAAGHALT FAHASGGQER YYHARAVKLA
DGGGHVYGYM EVLQDITSVK AGELNALRQS ERLAGIARKA EGIAANVAEA SGILEEQVTE
AARGADQQQQ RSSESATAME EMNATVREVA QNASDTHLMT EDVRRKASHG AELVDGVVRA
VDGLERQSLE LRTEMEQLGA KAADTGKVLG VITDIADQTN LLALNAAIEA ARAGDAGRGF
AVVADEVRKL AEKTMQATGE VEQVIMGIQQ YTARSVQATE TAVRAVSESR GLAGEAGRML
HEIVGAVHTA SDQVNSIATA AEEQAATSEE INRIIMEVNE ISDDTAQRMA EAEHAVRSLS
GEAAALRALI DSMHDET