Gene Dde_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1254 
Symbol 
ID3755243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1268854 
End bp1269399 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID637782125 
Producttartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit 
Protein accessionYP_387750 
Protein GI78356301 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCT ATTATCTGCA GACCCCCCTG CGCGACCAGG ATACCGAACA GCTTAAAGCG 
GGCGATGTCG TTTTTCTGAA CGGCGAAATA TTCACCGCCC GCGATGCCGC ACACAAGCGC
ATGATGGAAA CGCTGGAAAA GGGCGAGGCG CTGCCTTTTG AAGCTCAGGG GGCCGTCATC
TACTATGTGG GGCCCACACC TGCCCCCCCC GGCCGTCCCA TCGGTTCGGC CGGTCCCACC
ACCAGCGGCC GCATGGACAC ATACACCCCC CGCATGCACA GTCTGGGCGT AAAGGCAAGC
ATAGGTAAGG GCAAGCGCAG TCAGGACGTA ATCGATGCGC TTAAACGGCA CAAGGCTGTC
TACTTCGGCG CCACCGGCGG TGCCGGAGCC CTGCTTTCGC AATGCATCAC CGCCGCAGAA
GTGGTCGCAT ACGAAGAACT GGGGCCTGAA GCCATACGCC GGCTGACCGT CAAAGAGTTT
CCGCTGCTGG TCATCAACGA CTGTCACGGC GGCGAACTGT ATGTAAAACC CGCTCTGGAC
CGCTAG
 
Protein sequence
MATYYLQTPL RDQDTEQLKA GDVVFLNGEI FTARDAAHKR MMETLEKGEA LPFEAQGAVI 
YYVGPTPAPP GRPIGSAGPT TSGRMDTYTP RMHSLGVKAS IGKGKRSQDV IDALKRHKAV
YFGATGGAGA LLSQCITAAE VVAYEELGPE AIRRLTVKEF PLLVINDCHG GELYVKPALD
R