Gene Dde_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1183 
Symbol 
ID3755207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1212208 
End bp1213113 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID637782053 
Productputative permease of ABC transporter 
Protein accessionYP_387679 
Protein GI78356230 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.056047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAGG TACTTACAGG CACCACCGCT GCCCAAGAGG AAAAATCACA CACCCCTCTG 
GTCGAAGCCA TGCTGAGGCT GCACAAAAAC CGCACAGCCA TGGCCGGACT CGTCATTGTG
GGCATATTTG TATTTCTGGC CTTGTTCGGC CCGCTTATAG CGCCGCATGA CCCGCTGGAA
CAGTCACTGT ACAACAAGCT CAAACCGCCG GTATGGGATG CCAGAGGCAG CATGAGCTTT
TTTCTGGGAA CCGATGATTT CGGCCGCGAC CTTCTTTCGC GCCTCATACA CGGCGCCCGC
ATTTCCATGC TTGTCGGGGT GGTATCGGTA TCCATCTCTT TGTTTTTCGG CACCATTGCC
GGTGCAGTGG CCGGTTTTTA CCGTGGCTGG GTCGATGTCA TCATCATGCG CGTCATGGAC
ATTCTGCTGG CTTTCCCCAG CATTCTGCTG GCTATCGTCA TTGTGGCTTT TTTAGGCCCC
AGTCTGGAAA ACGCCATGAT CGCCATCGGC ATCGTATCCA TTCCGCGCTA TGCCCGCATC
GTACGCGGCA GTGTGCTGGA AGAATATTCC AAAGACTATG TGCAGGCCGC CCGCGCGCTG
GGAGCCTCCG ACTTCCGTCT TATTTTTCAG CACATTCTGC CCAACTGTCT GGCGCCGCTC
ATCGTGCAGA CCACGCTGGG CTTCGCTTCC GCCATTCTAG AGGCGGCAGC CCTCAGCTTT
CTGGGGCTGG GCGCGCAGCC TCCGACCCCG GAATGGGGGG CCATGCTGGC CGGCGGCCGC
GCATTGATTC TGCGCGCATG GTGGGTGGTC ACCTTTCCGG GCATCACCAT ACTGCTGGCC
GTTCTCGGCT TTAACCTGCT GGGCGACGGG CTGCGTGATG CGCTCGACCC GAGACTGCGC
GATTAG
 
Protein sequence
MSQVLTGTTA AQEEKSHTPL VEAMLRLHKN RTAMAGLVIV GIFVFLALFG PLIAPHDPLE 
QSLYNKLKPP VWDARGSMSF FLGTDDFGRD LLSRLIHGAR ISMLVGVVSV SISLFFGTIA
GAVAGFYRGW VDVIIMRVMD ILLAFPSILL AIVIVAFLGP SLENAMIAIG IVSIPRYARI
VRGSVLEEYS KDYVQAARAL GASDFRLIFQ HILPNCLAPL IVQTTLGFAS AILEAAALSF
LGLGAQPPTP EWGAMLAGGR ALILRAWWVV TFPGITILLA VLGFNLLGDG LRDALDPRLR
D