Gene Dde_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1182 
Symbol 
ID3755206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp1211222 
End bp1212199 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content58% 
IMG OID637782052 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_387678 
Protein GI78356229 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00551018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC CGCTTCTTTC CGTCGAAGGC CTTTCGACTT ACTTTTATAC CGACAGAGGC 
GTTGCCAAAG CCGTGGGTGA TGTCAGCTAC TCCATCAACC CCGGAGAAAC ACTGGGAGTT 
GTCGGCGAGT CGGGCTGCGG CAAAAGCGTC ACCGCGCTTT CAGTCATGCG GCTCATTCCC 
GAACCGCCGG GCAGAATAGT CTCCGGCAAA ATCATGTTTG ACGGTACTGA CCTGCTGAGC 
CTGTCCGAAA AACAGATGCG CCATGTCCGC GGCAACAAGA TATCCATGAT ATTTCAGGAA 
CCGATGACAT CGCTCAACCC CGTGTTCCGT GTGGGTGACC AGATTGCCGA AACCCTCATC 
CTGCACGAAG ATCTGAGCAA AAAAGCCGCC CGCGACAGGT CGGTTGAACT GCTGAAAAAA 
GTGGGGATTC CCTCTCCTGA ATCCAGGGTG GAAGATTACC CGCACCAGAT GAGCGGCGGT 
ATGCGCCAGC GCGTGATGAT AGCCATGGCG CTGGCATGCA ACCCCAAGCT GATCATCGCG 
GACGAACCCA CCACCGCGCT GGATGTGACC ATACAGGCAC AGATACTTGA GCTGATGGAT 
AACCTGCGCG AGACAACCGG CACCGCCATT CAGCTTATCA CTCATGATCT TGGCGTGATA 
GCGGAAACAG CGCATAAAGT TGTGGTCATG TACGCCGGAC GGGTGGTGGA GCAGGCCGAA 
GTCCGCGAGC TGTTCAACAA CCCTCTTCAC CCCTACACGC GCGGCCTCAT GCGCTCCATC 
CCCGGACTGG GCGCACATGC GGACAAGGAA CGTCTGGAAA CCATTCCGGG CATGGTTCCT 
TCGCTGCTCA ACCTGCCGCA GGGGTGCCGC TTTCATGACC GGTGCAGACA CGCCTTCGAC 
CGCTGCCGTC TGGAAGAACC CCAGCTTGAT CCGGCAGCCG ACGGGCATCT TGTACGCTGC 
TGGCTGTGTC AGGAATAA
 
Protein sequence
MSEPLLSVEG LSTYFYTDRG VAKAVGDVSY SINPGETLGV VGESGCGKSV TALSVMRLIP 
EPPGRIVSGK IMFDGTDLLS LSEKQMRHVR GNKISMIFQE PMTSLNPVFR VGDQIAETLI 
LHEDLSKKAA RDRSVELLKK VGIPSPESRV EDYPHQMSGG MRQRVMIAMA LACNPKLIIA 
DEPTTALDVT IQAQILELMD NLRETTGTAI QLITHDLGVI AETAHKVVVM YAGRVVEQAE 
VRELFNNPLH PYTRGLMRSI PGLGAHADKE RLETIPGMVP SLLNLPQGCR FHDRCRHAFD 
RCRLEEPQLD PAADGHLVRC WLCQE