| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1071 |
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| Symbol | |
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| ID | 3755457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 1096568 |
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| End bp | 1098976 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637781940 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_387567 |
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| Protein GI | 78356118 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.43493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGCC ATGCATGCAG GCTCCGGACC GTTTGCGTGC GGGCCGTGTG CGCCGTCTGG
CTGATTGCTC TGTACGCGGC CGGTGCCGTG GCTGCTCCTG CCGTTGCGGC CGCTGCCGTG
GGGGGCGCTC CGGCACGGGC GCTGCTTATT TCATCTTATC ACCCTGGATT CCCGACTTTT
TTTGACCAGA TAGCGGGCCT GCGTTCTCAG CTTGATGCCG CCGGAGTGCT GCTGGATGTG
GAATTTATGG ATTCCAAGCG GTTTGCTCCC GAAAAGGTTT CGCCCCTGTT CAAAGACATG
CTGAAGCGCA AGCTGGCGGT ACTGCCGCCG TATGATATCG TGTTCTGTGC CGATGATAAC
GCGCTGCAGT TCATGCTTGA GCACGGCAGA GAGCTTTTCC CCCTTACTCC GTGCATTTTT
ATGGGCATCA ACAATGTGGG GCTGGCTGTC TCGCTGCGGC AGGATGAACT GTTTACGGGC
GTGGTGGAAT CTGTATCCGT GACGCAGACC CTTGCGCTGG TGCGGCAGCT TTTTCCTCAG
ATGACCGGCG TTGCTGTGCT GGTGGACGGC ACTCCCAGCG GACAGGGTGA CCTGAAAACC
GTTCTGGCTG CGGAACGGGA CTTTCCGGAA CTCAGCTTTT CGGTGATTTC TCTGCAGGAT
ATGAGCTGGG ATGCCTTTGG CGCGGCACTG GAAAAGGTGC CGCCGACCAG TGTCGCACTG
CTGCTTTCGG CGTATGTCGA TGCCGCCGGC GAACGCAGAA CATTTGAGTC ATCGCTGGAT
TTTATAGCTG CCCACCTGCG TGTTCCGCTG CTGCATCTGT GGGAGCACGG CATAGGAGAG
GGCGTGCTGG GGGGACGTGT GGTCAGCCAT CACGAACAGG GACGGTTAGC CGGCATGCTG
GGGCTGCGGG TGATGCGGGG CGAATCCGCT GCCGTGGTGC CGGTGGTGCG CGGTGATGCG
GCTAACAGAT ATATTTTTGA TTTCAGACAG CTGGAAAAAT TCGGCGTGCG GCTGTCGCGC
CTGCCTGAAG GCAGTGAAAT ACGGTATCGC AGCAGTACGG TATGGGAGCG TAACCGCTGG
GGCATTATCA TCGCTGTGCT GGTGGTGCTG CTGCAGGCAC TGGTCATACT CATGCTGCAT
ACGAGCAGGC GCCGTCTGCG CGACAGTGAA GAGGAACTGC GCCTGTGGGG TGTGGTGTTC
CGCCATGCGG GGTGGGGCAT AGCGCTGGGG GTGGGCGATG ATGACAGGCT GACTCTTGTG
AACCCCAGAT ATGCCGAGAT GCACGGGTAT ACCGTGGAAG AGATGCAGGG CATGTCGGTG
CTGGAGCTGT ATCCGCAGCG GGAATGGGCC GCACTGAAAA GCCAGCGTGC GCGTGCGCTG
GCAGACGGCC GCGCAGAACA GGAAAGCGTG CACCTGCGTA AGGACGGCAG CAGTTTTCCG
GCGTGGGTTG ATATTTCCGT CGTACGCGGC AGTTCGGGCG GCGTTACTTA CAGAGTGGTG
AATGTGCAGG ACATATCGGA GCGGGTGCGT ACACAGGAAC TGCTGGTTGA AACGGAAAAA
ATGATGTCTG TGGGCGGACT GGCAGCAGGT ATGGCGCACG AGATAAATAA CCCTCTGGGT
ATTGTGCTGC AGAGTGTGCA GAACATGCAG CGCCGCCTTG ACCCGTCACT GGAAGCCAAC
GCACGCGAAG CAGCAGCCTG CGGGGTGAAT CTGGAAAATG TGCAGACGTA CATGGAGCGG
CGCAGCATTA TGCGCTCGCT CGAGCATATC CGCGAGGCAG GACTGCGTGC GGCCGAGATA
GTACGCAACA TGCTGGATTT CACCAGACGC AACGATGCCG GACGCAGCAC CTGCGACATT
GCCGTGCTGC TGGAAAAGGT GCTGATGCTG GGGTCCAGCG ACTACGACCT GAGCAAAAAA
TATGACTTCA GGAATATACG CATAGTAAAG GATATTGAAG CGGACCTGCC CGCCGTACCA
TGTGTGCGCA CAGAGATTGA ACAGGTTTTT TTCAATATCA TCCGTAATGG TGCCGAAGCC
ATGAGCGAAC ACCCCGTGGC AGGCAGGGTG CCCACCCTTG TCATCTGCGC GCGCCGTTCC
GGCCGCTGGC TGCTGGTCGC CATACGGGAC AACGGGCCGG GCATGTCCGG CGAGGTGCGC
AGAAGAGTGT TCGAGCCGTT TTTCACCACC AAGCCGGCAG GCAGAGGTAC CGGTCTGGGG
CTTTCGGTGT CGTATTTCAT CATCACGCGT AACCACGGCG GCAGGATAGA GGTGCACTCG
ACACCTTACG AAGGCTCCGT CTTTCTGGTG GCCTTGCCTG TTCCGGGGCA GCCCGCCGGG
GCGGATGACG CTCCTGATTT TCCCCTTATG GATGAACTGA GCCGCAGGGC GTTGCTCGGT
GCGGGCTAG
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| Protein sequence | MPGHACRLRT VCVRAVCAVW LIALYAAGAV AAPAVAAAAV GGAPARALLI SSYHPGFPTF
FDQIAGLRSQ LDAAGVLLDV EFMDSKRFAP EKVSPLFKDM LKRKLAVLPP YDIVFCADDN
ALQFMLEHGR ELFPLTPCIF MGINNVGLAV SLRQDELFTG VVESVSVTQT LALVRQLFPQ
MTGVAVLVDG TPSGQGDLKT VLAAERDFPE LSFSVISLQD MSWDAFGAAL EKVPPTSVAL
LLSAYVDAAG ERRTFESSLD FIAAHLRVPL LHLWEHGIGE GVLGGRVVSH HEQGRLAGML
GLRVMRGESA AVVPVVRGDA ANRYIFDFRQ LEKFGVRLSR LPEGSEIRYR SSTVWERNRW
GIIIAVLVVL LQALVILMLH TSRRRLRDSE EELRLWGVVF RHAGWGIALG VGDDDRLTLV
NPRYAEMHGY TVEEMQGMSV LELYPQREWA ALKSQRARAL ADGRAEQESV HLRKDGSSFP
AWVDISVVRG SSGGVTYRVV NVQDISERVR TQELLVETEK MMSVGGLAAG MAHEINNPLG
IVLQSVQNMQ RRLDPSLEAN AREAAACGVN LENVQTYMER RSIMRSLEHI REAGLRAAEI
VRNMLDFTRR NDAGRSTCDI AVLLEKVLML GSSDYDLSKK YDFRNIRIVK DIEADLPAVP
CVRTEIEQVF FNIIRNGAEA MSEHPVAGRV PTLVICARRS GRWLLVAIRD NGPGMSGEVR
RRVFEPFFTT KPAGRGTGLG LSVSYFIITR NHGGRIEVHS TPYEGSVFLV ALPVPGQPAG
ADDAPDFPLM DELSRRALLG AG
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