Gene Dde_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_1052 
Symbol 
ID3755477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp1080176 
End bp1081195 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content61% 
IMG OID637781921 
Productiron-sulfur cluster-binding protein 
Protein accessionYP_387548 
Protein GI78356099 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000925292 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAC GCTCCCGCAT ACGGCGCGGC AGGATTTCGC CTGCACGCGT GCGACGCACT 
GTACAGCTTG CCTTTGGCCT GTTCTGCATT TTCTGCGGCT GGCGTTTCTT TCTTTATTAT
CAATGGGCCA CCGGCGCATC GGCCGTCTAT GTACCCAAAC CGCCCATGGT CGAAGGGTTT
CTGCCCATCA GCGCGCTGCT GGGGGCCGTG CATTTTTTCA ATACCGGCAT GTGGGACCCC
GTGCATCCCG CAGGGCTGAC CATCTTTTTC GCGGCACTGG CTATCTGCCT GCTGCTGCGC
AAGGGGTTCT GCGGGTACAT ATGCCCCGCA GGCTGGGCCA GCAATCTGCT GGAACGCACC
GGCAAACGCC TGGGGCTGAA CCGCAGCCGT CCGGCACCTG CACGCACTGC GGTGCATAAA
GCCATCCGGA CAGTGCTGCA CGCTCCCAAG TATATCCTGA TGGCCGGTTT TCTGTGGACA
ATGAGCACCG GCATGGACGC ACGGGCAGTG GAATCCTTTC TGACCGGCCC TTACAACATG
GTGGCCGACA GCAAAATGCT GCTCTTTTTT CTGCACCCTT CGGCCACGGC GCTGACAGTG
CTGGCGGTAC TGGCCCTGCT GAGCCTTTTT GTTTCCAACC CGTGGTGCCG TTTTCTGTGT
CCTTATGGCG CGCTGCTGGG CATAGCCGCC CTGTTCAGCC CCTGCGCCGT ACGGCGCAAT
GCTGCAGCAT GCACCGGCTG CGGCCGGTGT TCCGCGGCCT GCCCTGCCGG TATAGCCGTG
CATGCGCAGC AGCGGGTCAA CAGGGCGGAA TGCATGGGCT GCACCGAATG CGTAAGCAGC
TGCCCGCAGA AAGACTGCCT GCAGCTGACC TGCCTGAACA AACCACAGTA TGACTGGGCC
ATCGCCTACG GCACTGTGGC ACTGCTGTGG ACGGCGTATC TGGCGGCGGT CTGGTGGGGA
AAATGGGATG TTTCAATTGA CGCCGCTCTG ATACAGAAAC TGCACAGCAC CATGATGTAA
 
Protein sequence
MLSRSRIRRG RISPARVRRT VQLAFGLFCI FCGWRFFLYY QWATGASAVY VPKPPMVEGF 
LPISALLGAV HFFNTGMWDP VHPAGLTIFF AALAICLLLR KGFCGYICPA GWASNLLERT
GKRLGLNRSR PAPARTAVHK AIRTVLHAPK YILMAGFLWT MSTGMDARAV ESFLTGPYNM
VADSKMLLFF LHPSATALTV LAVLALLSLF VSNPWCRFLC PYGALLGIAA LFSPCAVRRN
AAACTGCGRC SAACPAGIAV HAQQRVNRAE CMGCTECVSS CPQKDCLQLT CLNKPQYDWA
IAYGTVALLW TAYLAAVWWG KWDVSIDAAL IQKLHSTMM