| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0995 |
|---|
| Symbol | |
|---|
| ID | 3755530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1020447 |
|---|
| End bp | 1021304 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637781862 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_387491 |
|---|
| Protein GI | 78356042 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.30539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTTCG CGTATCTGGG GTTGTACACA TGGAACCTGC GGACCGGTGT TCTTGACAAT
GCCGCTTCGC ACACGGGGCT TGAGTTTGCA GGGGCCGTTC TGAAACCGGG CGAATGGGTT
CACCGAAGCG CCGTGGATTT CTGGGAACAG TATCTGTACC TGGTCGATGT ACGCCAGCAG
AACGAACGCC TGGCAGCTCA GGTGAAAGAT CTTTCATTTG AACTGGCAAA GGCACGAGAA
GAACAGCAGG AACTTTTACG GCTGCGCGCC CTTAACGGTT TTTCCGCTCC TGCGGAGTGG
GAACGGGTGG GAGCCCGCAT CATTGCCCAG CGCCTCGGTT CCGAAGCCGC TCTTGACAGC
ATTATGCTGA ACAAGGGCTA CCTTCAGGGA GCAGGTTCCA ACACTCCCGT GGTGACACAC
AGGGGAGTTG TGGGCAGAAT CATGCGGGCA GGGCCTTTCA CGGCCACGGT GCAGCTTATC
ACCGACCCCG CCAGCCGTAT TGCCGTGCTC GGTTCAGCAA GCCGCACACC GGGCATTCTG
ATGGGCACAG GGGCCCGCTC GGAACTTGTT CTGCGGTTTG TTCCGCTCAA TGCGCAGCTG
GAAGAAGGCG AAACGCTCAT AACTTCCGGA CTGGCGGGCG CCTATCCCAA AGGCCTGCCC
GTGGCGCGCA TAGTGCGTAT TGAACATTCC GATATCTCAC TCTTTCAGAC CGTGCACGCG
GTTCCGCTGG CCGGCATAGA CCGGCTGGAA GAAGTGCTGC TGCTGCAACG CCCGGCAGGA
CCGCATGCCG CGTTTCACGC AGTGGAAACG CCCCCGCAGG CCGGAGCGCA TACAGCGCAC
GCCAACGCCA CGCGCTAG
|
|---|
| Protein sequence | MLFAYLGLYT WNLRTGVLDN AASHTGLEFA GAVLKPGEWV HRSAVDFWEQ YLYLVDVRQQ
NERLAAQVKD LSFELAKARE EQQELLRLRA LNGFSAPAEW ERVGARIIAQ RLGSEAALDS
IMLNKGYLQG AGSNTPVVTH RGVVGRIMRA GPFTATVQLI TDPASRIAVL GSASRTPGIL
MGTGARSELV LRFVPLNAQL EEGETLITSG LAGAYPKGLP VARIVRIEHS DISLFQTVHA
VPLAGIDRLE EVLLLQRPAG PHAAFHAVET PPQAGAHTAH ANATR
|
|---|
| |