Gene Dde_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0908 
Symbol 
ID3755636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp935491 
End bp937002 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content48% 
IMG OID637781775 
Producthypothetical protein 
Protein accessionYP_387404 
Protein GI78355955 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.207571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA ACGTTTTGGA ATCTCGCCCG GCAGGCTACG CGTATCTGCT TGATATGATG 
GGGCTGACAG GCATGCCCCA TTGGCATACC TCGTTTGTGT CTTCATCAGG AACTCACAGA
TCGAAGGTTC AGGATGGAAC AATAGAAGAC ATCTACCCTA TAAGGTACTG GCCCGGGGAA
AAGGTCGGAG ACCATCTTGA ATTCGTGCTG AAATATGACG GGGTCAATCT GGGCTTACTG
GCTCGAATCT TCGAAAAGGT TTCTCAGGAT GAGCTAACCG AGTTCATCAA ATCCAAACCT
ACGGGGAAGT ATGCTCGGAG AGTCTGGTTC TTCTATGAGT TTCTGACCGG CAAACAACTG
CCTGTCGATG ACCTGACTTC CGGCAATTAT GTCGATGCAT TGGAAGCCAA AGATTATTAC
ACCGTTCAGA ACGGAGAAAA ATCTTCACGT CACCGCATTG TAAACAACCT TCTTGGCCCC
AAATCGTTTT GCCCTGTCGT AAGAAGGACC GAAAAGCTTG CCAAGCTGGA TTCAGCCGAC
CTGCGAAAAA GGTGTGAGGA TATTGTCACC GCATATCCAC CGGAACTGCT TCGCCGGGCA
CTGAGCTACC TCTACAACAA GGAAACGAAG TCATCTTTTG AAATTGAGCA CATAAAGCCC
AACGCTTCCC GTACTGAAAA ATTCATCACA TCGCTGGAGC TTGCCGAAAA GGAAGACTTC
TGTGAAAAGG AAAGGCTGAT AGAGCTTCAG AACCGAATCG TCGATCCGCG TTTCAAAGAC
AGTGACTATC GGGTGAGCCA GAATTATGTC GGCCAGACGG TTGCCTATCA AAAGGAGATC
ATACATTTCA TTTGTCCAAA ACCTGATGAT CTGCAAAGCC TCATGGAGGG ATTGATTGAC
TCCCATAAGC GGATGAAAGT GGGAAATGTA TCTCCGGTCA TTCATGCGGC GAGCATTGCC
TATGGCTTTG TGTTCCTGCA CCCGTTTGAA GATGGGAACG GACGAATTCA TCGGTTTCTG
ATACATAACA TTCTGTCGCT GCAGGAGCTG GTGCCACGCG GACTCATGTT TCCGGTTTCG
GCCGTCATGC TCAAAAATCC GGCGGCCTAT GATGCATCAC TGGAAGCGTT CTCTCGACCC
TTGTTGCAAC TCATCGATTA TCGGTTGGAT GAAATGGGGC AAATGACCGT CGAGAACGAT
ACCGCATGCT GGTATCAGTA TATGGATATG ACAGCTCAGT CAGAAGCCTT GTATGAGTTT
GTTACCAAAA CGATTGAAGA AGAGCTTGTG GAAGAACTCA GCTTTCTGGC CAACTACGAC
AATACCAAGA AGGCGATACA GGACATCATT GATATGCCTG ACCGCCTGAT CGACTTATTC
ATCCAGTTGT GTCTGCAGAA CAACGGCAGC CTTTCTGCAA GGAAGAGATC CGCTCACTTT
GACTTCCTGA CCGATGAAGA ATTGTCGGCC ATGGAACAGG CAGTGAAAGA CGGCTATAAC
CGACCCGAAT AA
 
Protein sequence
MDINVLESRP AGYAYLLDMM GLTGMPHWHT SFVSSSGTHR SKVQDGTIED IYPIRYWPGE 
KVGDHLEFVL KYDGVNLGLL ARIFEKVSQD ELTEFIKSKP TGKYARRVWF FYEFLTGKQL
PVDDLTSGNY VDALEAKDYY TVQNGEKSSR HRIVNNLLGP KSFCPVVRRT EKLAKLDSAD
LRKRCEDIVT AYPPELLRRA LSYLYNKETK SSFEIEHIKP NASRTEKFIT SLELAEKEDF
CEKERLIELQ NRIVDPRFKD SDYRVSQNYV GQTVAYQKEI IHFICPKPDD LQSLMEGLID
SHKRMKVGNV SPVIHAASIA YGFVFLHPFE DGNGRIHRFL IHNILSLQEL VPRGLMFPVS
AVMLKNPAAY DASLEAFSRP LLQLIDYRLD EMGQMTVEND TACWYQYMDM TAQSEALYEF
VTKTIEEELV EELSFLANYD NTKKAIQDII DMPDRLIDLF IQLCLQNNGS LSARKRSAHF
DFLTDEELSA MEQAVKDGYN RPE