Gene Dde_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0893 
Symbol 
ID3755621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp921657 
End bp922280 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID637781760 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_387389 
Protein GI78355940 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAGAA ACAGAGAAGA CGACATTACG CCGTTGCAGC AGGAAACACT TGATGAAATA 
TGCCGGTACG TTTCAGCCAA AGGGTATCCG CCGACGGTTA AGGAAATGAG CGAAACATTT
GGAATCAGTC ACGCCAGTGT GCATGACCGG ATCAACCAGC TGGTTCGCAA AGGTTATTTG
AAAAGAGAGG AAGGTAAGGC TCGCGGTCTG ACCGTGACCA AGCATCCTCA GACAAACGCG
GTCGCCCTTG TGGCGGTTCC GATTGTCGGC ACGGTTGCAG CCGGTCATCC GATTTTCGCT
CATGAGAACA TCACGGGCGA GGTTCTGGTG GAAGCATCCG TTGTCGGATC AGGCAAGTGC
TTTGCCTTGT ACACACAGGG CGACAGTATG ATCGATGCCG GAATAAACGA CGGCGACCTG
ATCATTGTGA GGCGTCAGCC AATTGCCGAA GACGGTGATA TCGTTATTGC GCTGCTTGAC
GATGAAGCCA CGGTCAAAAG GCTGAAAATT GATAATGAGC TCATCGAGCT GGTCCCGGAG
AATCCGAGGC TGAAACCGAT CAGGGTCAAA CCTGAAGATG AATTGAGGAT TCTCGGCAAA
GTGGTGGGCC GTAAACGAAT TTGA
 
Protein sequence
MGRNREDDIT PLQQETLDEI CRYVSAKGYP PTVKEMSETF GISHASVHDR INQLVRKGYL 
KREEGKARGL TVTKHPQTNA VALVAVPIVG TVAAGHPIFA HENITGEVLV EASVVGSGKC
FALYTQGDSM IDAGINDGDL IIVRRQPIAE DGDIVIALLD DEATVKRLKI DNELIELVPE
NPRLKPIRVK PEDELRILGK VVGRKRI