| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0881 |
|---|
| Symbol | |
|---|
| ID | 3755645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 911760 |
|---|
| End bp | 913040 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637781747 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_387377 |
|---|
| Protein GI | 78355928 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000177565 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TACATGTACT CAGTCAGCGT CCGGAAATGA CGGGCAGCGG GGTCAGCACC
TTGGCAATGC TGCGCTGTGC AGGCGATGCA GGGCACAGCA ATGCACTGGT GGCGGGAGTG
CCCGCGGCGT TTGCGGTGCC CGCGCAGCTG GGCGGCGGCA CCCCGCAGGC ACAGGAAGAA
CACTGCCTTT GTTCTTTCAG CAGCTTTGTG CGGTTCGGCC GCGATCTGCC CTTTGCCGTC
ACCGGCATGA GCGACGTCAT GCCGTATGAA TCAAGCAGAT GGGCACAACT GGACGACAGC
CAGCTTGATG CGTACGAAGC CTGTTTCGGG GAGTGCCTGC GGAATGCAGT GCAGGCCTTT
CGTCCGCAGA TCATTCACAG TAATCATCTG TGGGTGGTGA CGGCGCTGGC ACGCAGATTG
TTTCCGCAGA TTCCCGTGGT TGCATCGTGC CACGGGTCTG ACCTGCGGCA GTTCCGTTCC
GTGCCCCGTG TGGCGCGCCG CGTTCTGGCA GCGTGCCGCA TGGTCGATGG TGTCTTTGCC
CTTTCGCAGG CGCAGAAGCG CGATATTGAA ATGCTGTACG GCATTGACTC CCGGCGCATC
AGCGTTGTGG CTGCCGGATA TGACCGGCAG GTCTTCGGCT GCGGGCGCCC GTGGCAGCGC
AATACTGCCG GTGGCCCGTT GCGCGTGCTG TACGCCGGTA AACTTTCCCG GGCAAAGGGC
GTTCCGTGGC TGCTGCGGGC ATGTGCCCGG CTGCTTGGCT GCGGGCACGA TATGGTGCTG
GATATCTGCG GCGGCGGCAC AGGTTCCGAT TACGAAGAAT GCGTTGCGCT GGCACGCGGG
CTGTGTGAAC GGGCGGTGCT GCACGGCAAT GTGTCTCAGA ACCGGCTGGC GGAGCTGATG
CGTGCAGCCC ATGTATTTGT GCTGCCGTCG TTTTTTGAGG GACTTCCTCT GGTGCTGCTT
GAAGCACTGG CCTGCGGGTG CCGTCTGGTT GCCACGCGAC TTGAAGGTGT GGAGGAAGTG
TTTGCCGGTC TGCCGTCCGA GGCGGTTACG CTGGTGGACC TGCCCCGTCT GCATGATGTG
GACAGGCCCT TTGCGGAGGA CGAACGCCGG TTTGAGCATA ACCTGCATGC CGCCCTGAAG
AATTGCCTGC AGACCATGAA CGCCCCTGTT GCCGGAGGTG TCAGTCCGGC TGTGGATGCC
CTGCTTGACG GGTATTCATG GGAAGCTGTT TTCAGCCGTG TTGATGCGGT TTACCGTCGC
ATTGTTTCTG ATTGCTGCTG A
|
|---|
| Protein sequence | MRILHVLSQR PEMTGSGVST LAMLRCAGDA GHSNALVAGV PAAFAVPAQL GGGTPQAQEE
HCLCSFSSFV RFGRDLPFAV TGMSDVMPYE SSRWAQLDDS QLDAYEACFG ECLRNAVQAF
RPQIIHSNHL WVVTALARRL FPQIPVVASC HGSDLRQFRS VPRVARRVLA ACRMVDGVFA
LSQAQKRDIE MLYGIDSRRI SVVAAGYDRQ VFGCGRPWQR NTAGGPLRVL YAGKLSRAKG
VPWLLRACAR LLGCGHDMVL DICGGGTGSD YEECVALARG LCERAVLHGN VSQNRLAELM
RAAHVFVLPS FFEGLPLVLL EALACGCRLV ATRLEGVEEV FAGLPSEAVT LVDLPRLHDV
DRPFAEDERR FEHNLHAALK NCLQTMNAPV AGGVSPAVDA LLDGYSWEAV FSRVDAVYRR
IVSDCC
|
|---|
| |