| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0456 |
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| Symbol | |
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| ID | 3756271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 465122 |
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| End bp | 465793 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637781316 |
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| Product | TonB-like |
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| Protein accession | YP_386952 |
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| Protein GI | 78355503 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00460811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATT GGTGCGTGCG GATGGCGGCC GTGGGCGGCG GAGTGGGGGT CACGCTGTTG
CTGCTGCTTT TCCTGCTGGC AGGAACTGCT CCCCGCGTGG TGACAGATGA GCCTGTGGTG
CATGGCGCGG TCAGGCTGTC TTCGTTTACC GAAGCTCCGG TACGCGAGAC CGAGACCTAT
GCCACCCGCG ATGTGCAGCA GGTGCAGCCC CTTGAAAAGA TGTCAGAAAT GGATGTGTCT
CTTGATTCGC CGCAGTTGGA AATGGACATG CCCTCCATGG AAATGGATTT CGCGCCCGAA
CTGGCAGGCA CCGTGCCGCT GAGCGGAGTC CCTTCCGTGG CTTCGGCCGG CGGGTTGTCG
GCGCCGTCGG GCGGTGCCTT TACGCTGGGC GAGGTTGATG AACAGCCGCG CCCGCTTTAT
GCGCCGGCCC CGCTGTATCC GATGCAGGAA AAACGTCTGG GGCGTGAATG CACCGTGGTG
GTGCGCATTC TGCTGGCTGA GGACGGAACG GTGAAACAGG CGACTCCCGT GTATGCGGAA
GACGATACCC GGACGTTTCA TGAGGCCGCC GTGGAAACGG TGCTGCGGTG GCGTTTTGTA
CCCTGCCGCA AAGACGGCAG GGCCGTGCAG TGCATTGCCG AGCAGCCTTT TACCTTTTCA
CTGCATCAGT AA
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| Protein sequence | MTDWCVRMAA VGGGVGVTLL LLLFLLAGTA PRVVTDEPVV HGAVRLSSFT EAPVRETETY
ATRDVQQVQP LEKMSEMDVS LDSPQLEMDM PSMEMDFAPE LAGTVPLSGV PSVASAGGLS
APSGGAFTLG EVDEQPRPLY APAPLYPMQE KRLGRECTVV VRILLAEDGT VKQATPVYAE
DDTRTFHEAA VETVLRWRFV PCRKDGRAVQ CIAEQPFTFS LHQ
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