Gene Dde_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0447 
Symbol 
ID3756262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp453541 
End bp456066 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content58% 
IMG OID637781307 
ProductTonB dependent receptor domain-containing protein 
Protein accessionYP_386943 
Protein GI78355494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000427237 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC TTCTTCTGGG CTGCATGCTT CTGCTGCTGA TGTCCGGCGC ATTGCCCGCG 
TCGGCTGCAG AGGCTGAACA GAAGGGTGGT CCGGCGGCGG GAGACCGGCC GGGAAACGCG
GTGCAGCTGG AACCGGCGCG CAAAAATGGC GGGCCTGCAG CCAATGCCAC CGGTCCGGCG
GCACATAACG GCACCGTGTA CCGGCTTGCT CCGGTTGATG TGCAGGAGGA GACGCGCGAG
ACCGGCCGGG CCACCATAGG CGGCAAGGCG CTGCGGTCCA TGCCTTCGCA TACCGGTTCG
CTTACCGAAG CCCTGAAGGG CATGCCCAAC GTGCAGTTTT CCAACGACAT GATTTCCGGA
CAGACGGCAG GGGAAATAGC TCCGCCGCGT ATCTCCATTT CGGGTGCAAA GCCGTATGAA
AACAACTTTA TGATTGACGG CATGAGCATA ACAAACCGCA TCAACCCGAG CGGGCTGGGG
GACAGTGCCT CCCAGAATGA TCTGACCGTG GGCGGGGGGG ACCAGACACT TTTTTACGAT
ACCCAGCTGC TGGACAACAT AACCGTGTAC ACCAGCAATA TTCCCGCCAG TTTCGGAGGA
TTTGTGGGCG GCGTGGTGGA CGGAGAACTG CGTGATCCCA AAATGGATGA ATGGCATTTC
AGCGTGACAG GCAAACATAC CCGCAGCAAG TGGTTCACTC TGCGCGGCGT GGATGAAAAT
TCTGAAAAAC CGTCCAGCCA GCCCCGTTTT TCCATCAACA CGGTTTCCGC CACTGCAGAA
GGGCCGGTGA GCGATACCGC GGGGCTGCTG CTGGCAGTTT CGCGCAAGCA TTCTGTCATA
CCCCTTAAGC GTGAAGAAAA CGACGGCACC ATCAATGATG GTGACCAGCA CCGCATAAGC
GACAACTTCA TGGCCAAGAT GGTCGTGCGT CCTTCCGACG ACCTGACGCT GAAAATCGAC
GCGACCTATG CCCCCTACGA AGAAAAACGC TGGCGCGAAA AGTGGCCGGA CAGCGACTGG
TTTTTGCAGA ACGATGCATA CCGTCTGGGG CTGCAGGCCG AATACGAGAC TCAGCACGGT
ACGCTGAGCG GCAAAACATC GTACATGCTG CACGGCTACA ACCGCGAATC GTCTTCGGCG
CACCGTTACA GCAACACCTC CACCGATGAG CAGCGCGGCG GCGTGGGTGA CCTGAAGCAG
GACACGCAGG AACTGGACAT GCGTTTCGAC TTCGACTCGG TGGACTACAC CGCGGGCATG
CTGACGTGGA ACGTTTCCAC AGGGGTGCTG TGGCACAACA CGCTGGTCGA TTTTACGGCC
GGTGCTGCGG AAGTGGACGT GGACGTGCTG ATGGCGGGCA ACCGGAGGAT TCTCACCAAT
TCCAAATACC TTGAGCATAG TCAGGAACTG TCGCTGAACA CGCTTGGCTA CTACGCCCAG
ACCGAACTTA CGCTGGGCAA CTTCACCCTT ACTCCGGGGC TGCGTGCCGA TTATGACGAT
TTTTCCACCA ATCTGGACAT AGCCCACCGC CTGAAGGCCG AATACGACAC CTTCGGCGAC
GGTTCTCTGC GGCTGACAGC GGGCCTGAAC CGTTATTACG GCGGTCAGCT TTCGGCCTAT
GCGCTTAAGC GGTACCGCCC GCAGATTGTG TTTCAGCAGC GCGACATGGA TGGCGACGGC
GTGTTCGAGT CGAGCAAGAC CACCTATGGA ACGGACAAGA AGCACACCAT GTCGGGGCTG
GATACGCCGT ATACCGATGA AATTTCCGCC GGTGTGCAGG GTGATTTTCT GGGCTTTGAA
TACGGGGTCG AGCTGGTGAA GCGTGACTAC AAGAACCAGC TGGTAAGCAA GAGCGACGAC
AAGAAAAGCT ACTATATGAC CAACGAAGGC AAGAGCGAAT ACGAAGGCAT AACGCTGACC
CTTGCCAGAG CCGTGCAGAC GCAGTCCATG GGCGACCACG TGTTCGGTCT GGGCATTACC
AAGTCCAAAC GCAAGACATT CAACGGCAGC TACGACGAAG ATGTCTACGA CGAGGCCAAC
GGTGTGCGGC TGGATTATGA CAAGGTCTAC TACAACGGCG AACTGACCGA CCGTAATGCG
CTGCCGGCAG ACGATTACAA CGCGCCTGTG GTGCTGACCT TTTCGTGGCA GGGGCATTTT
ATGGAAGATA CGCTGCGCCT GAATACCGTC ACCCGCTGGC GTGATTCGGC AACGGGGCTC
ATGGCCGATT CCCGTTTCAG CGATGACACG CCCCACGGCA CCACTTCGGG CAGCAATACC
AACAAAAGCG ACAAGTGGAT GGGCGAAGGC ACTGAATACC ACAACGCCTA CAAACACGGT
GTGATTTCCG GCGGGTTTGT GACCGACCTC GGCGTGGAAT GGGATGTGCT GAAAGAAGAA
GAGTACACCC TGACCATGCT CATGGATGTG AACAACGTGT TTGATGAATC GCAGGAAGTC
AGTGTGACCG AAGGTGAAGC CTCGCGCGGG CGTTCCTTTT ATGCCGGTTT CCGCTGCGAG
TTTTAG
 
Protein sequence
MKKLLLGCML LLLMSGALPA SAAEAEQKGG PAAGDRPGNA VQLEPARKNG GPAANATGPA 
AHNGTVYRLA PVDVQEETRE TGRATIGGKA LRSMPSHTGS LTEALKGMPN VQFSNDMISG
QTAGEIAPPR ISISGAKPYE NNFMIDGMSI TNRINPSGLG DSASQNDLTV GGGDQTLFYD
TQLLDNITVY TSNIPASFGG FVGGVVDGEL RDPKMDEWHF SVTGKHTRSK WFTLRGVDEN
SEKPSSQPRF SINTVSATAE GPVSDTAGLL LAVSRKHSVI PLKREENDGT INDGDQHRIS
DNFMAKMVVR PSDDLTLKID ATYAPYEEKR WREKWPDSDW FLQNDAYRLG LQAEYETQHG
TLSGKTSYML HGYNRESSSA HRYSNTSTDE QRGGVGDLKQ DTQELDMRFD FDSVDYTAGM
LTWNVSTGVL WHNTLVDFTA GAAEVDVDVL MAGNRRILTN SKYLEHSQEL SLNTLGYYAQ
TELTLGNFTL TPGLRADYDD FSTNLDIAHR LKAEYDTFGD GSLRLTAGLN RYYGGQLSAY
ALKRYRPQIV FQQRDMDGDG VFESSKTTYG TDKKHTMSGL DTPYTDEISA GVQGDFLGFE
YGVELVKRDY KNQLVSKSDD KKSYYMTNEG KSEYEGITLT LARAVQTQSM GDHVFGLGIT
KSKRKTFNGS YDEDVYDEAN GVRLDYDKVY YNGELTDRNA LPADDYNAPV VLTFSWQGHF
MEDTLRLNTV TRWRDSATGL MADSRFSDDT PHGTTSGSNT NKSDKWMGEG TEYHNAYKHG
VISGGFVTDL GVEWDVLKEE EYTLTMLMDV NNVFDESQEV SVTEGEASRG RSFYAGFRCE
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