Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0398 |
Symbol | |
ID | 3756291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 391085 |
End bp | 392902 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637781258 |
Product | acetolactate synthase catalytic subunit |
Protein accession | YP_386894 |
Protein GI | 78355445 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTT CCCGATCACG CGACCATGCC GCCGAAGCGC GGCCGTCTGC CGGAAAGGCT GCCATGCACG GCAGCAAAAC GCAGTGTCCG GCGCCGGAAA AACAGCAGCC TGCCGCCCGG CCGGAGCGCA TGACAGGTGC AGCAGCCGTT GTGCGGATGC TTGAGCGACA GGGGGTGCGG CATGTGGCCG GCATTCCGGG CGGTGCCAGC CTGCCGCTGT ACGATGCACT GGCAGCACGC GGCAGCATCC GGCACATTCT CACCCGTCAT GAACAGGCTG CCGGCTTCAT TGCGCAGGGC ATGGCCCGTG CCACCGGTGT TCCTGCCGTA TGTCTTGCCA CTTCCGGTCC CGGCGCCACC AATATCCTTA CCGCACTGGC CGATGCCAAG CTTGATTCGG TTCCGGTTGT CTGCATCACG GGGCAGGTAC CCACCACACT CATAGGTACC GATGCCTTTC AGGAGGTGGA TACCTATGGC ATGAGCATTC CTGTGACCAA ACATAATTTT CTGGTCCGCA CGGCGCAGGA ACTGCTCTCG GTCATTCCCG AAGCATTCCG CATTGCGGCT TCCGGCCGTC CTGGGCCGGT GCTTGTGGAT ATTCCGCGTG ATGTGCAGCT GGCCACGCTG GAGATAGACA GCTGGCCCGG ACCGGGGCTG CCCGATGCTC CCCTGATGCC GGATATGGAA GACGTGGTGG GTGCCGCCGC CATGATAGAC GAGGCGGAGC GTCCACTGAT GTATCTGGGC GGCGGGGTCA TCAGTTCCGG TGCCGCACCG GCGGCAAGGC GCATAGCCGA AAAGGCGGGC ATACCGGTGG CCATGACGCT TATGGGACTC GGGGCCGTTC CTTCGGAGCA TCCTCTTTCA CTCGGCATGC TGGGCATGCA CGCCGCGCGC TGCACCAACA TGGCTATGGA AGAGTGCGAC CTGCTTATTG TGGCGGGTGC CCGTTTTGAC GACAGGGCCA CAGGGCGTGT GGACAGCTTC TGCCCGCGGG CGCGGGTGAT TCATATCGAC ATCGATGCCA GCGAACTGGA TAAAATCCGC TCTGCCCATC TGGGTATTCA GGGCGATGTG CGGGCAACTC TGGAGGCGCT GGAGCCGCTG GTTGCCCCGT GCGCCCGCGA AAACTGGCTG CACCGCGTGG AAGAGCTGCG CAACGGCTGG GGGCTGGATT TGCCGCGCAC CGACGACCCC GTAAGTCCTT ACGGCATGAT TTTACGGACG GCGGAAATAG TGGGTCCGGA AGCCGTGGTG ACCACCGATG TGGGCCAGCA TCAGATGCGC ACGGCACAGG CATATCCTTT CAGCAGACCC CGGCAGTGGC TTACCTCCGG CGGGCTGGGC ACCATGGGGT TCGGTCTGCC CGCCGCCATC GGGGCCGCGC TTGCCTGTCC GGAAAGAACG GTGGTCTGCT TCACGGGTGA CGGCAGCCTG CAGATGAATA TTCAGGAACT GGCCACCGCC GTGGAGCAGC GCTGCAACAT CAAAATAATT CTTGCCAATA ACAACGCTCT GGGACTGGTG CAGCAGTTGC AGAATCTGTT TTTCGAGCGG CGGGTTTTCG CCACGGATTA TTCGGTACAG GTTGATTTTG TGCGTATTGC GGAAGGATTC GGCATGCCTG CCGTTGATCT GGGCGCCAGC CGTGATCCGC TGGGCATGCT GGAGGCCGCA CTGACCACGG CGGGGCCTTG TCTTGTGAAC ATTCCCGTGG CGGTTTCGGA AAGTGTTTTT CCCATGGTGC CCCCCGGCGC CGCCAACACA GAAATGATAG AAGGAGACGG CCATGACCGT ACAGAAGCAG CAGCCTGA
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Protein sequence | MSRSRSRDHA AEARPSAGKA AMHGSKTQCP APEKQQPAAR PERMTGAAAV VRMLERQGVR HVAGIPGGAS LPLYDALAAR GSIRHILTRH EQAAGFIAQG MARATGVPAV CLATSGPGAT NILTALADAK LDSVPVVCIT GQVPTTLIGT DAFQEVDTYG MSIPVTKHNF LVRTAQELLS VIPEAFRIAA SGRPGPVLVD IPRDVQLATL EIDSWPGPGL PDAPLMPDME DVVGAAAMID EAERPLMYLG GGVISSGAAP AARRIAEKAG IPVAMTLMGL GAVPSEHPLS LGMLGMHAAR CTNMAMEECD LLIVAGARFD DRATGRVDSF CPRARVIHID IDASELDKIR SAHLGIQGDV RATLEALEPL VAPCARENWL HRVEELRNGW GLDLPRTDDP VSPYGMILRT AEIVGPEAVV TTDVGQHQMR TAQAYPFSRP RQWLTSGGLG TMGFGLPAAI GAALACPERT VVCFTGDGSL QMNIQELATA VEQRCNIKII LANNNALGLV QQLQNLFFER RVFATDYSVQ VDFVRIAEGF GMPAVDLGAS RDPLGMLEAA LTTAGPCLVN IPVAVSESVF PMVPPGAANT EMIEGDGHDR TEAAA
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