Gene Dde_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0378 
Symbol 
ID3756349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp373171 
End bp373956 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content56% 
IMG OID637781238 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_386874 
Protein GI78355425 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTCT TCAATTTTGA TGAAGCCTCT TTCCTCAGCT TTCTGCTTAC CCTCATGCGC 
ATCAGCCTTG TGGTTTTTCT GCTGCCGGTA TTCGGGGGCA ATTCGGCACC CCGGCTGGTA
AAAGGTGCGC TGTGCATGGT GCTTACGCTG GCGCTGTGGC CGCATCTTTC CTTTTCCGGA
AGCCTGTTGC CGGGGCATCC GTTCGGCATT GCGCTTATGC TTGCGGGTGA AATCATCATG
GGCATCATGC TGGGGCTGCT GGTGCGTTTT TTCTTTGCGG GTATCCAGAC CGGCGGCGAA
CTGCTCGGGT TTCAGATGGG GTTTACCATG GTCAGTGTGG CAGACCCTCT TTCGGGGCAG
AGCACCAGCA TCAGTTCACA TTTCATGTAT ATGGTCAGTC TGCTTATTTT TCTGGTGCTT
GACGGGCATC TGGTGATGCT CAAAGGCCTT ACGGACAGCT TTGCGCTGGT GCCGCCCGGT
CAGCTGGTTT TCAGACACGC CTCGCTGCAC AACATGCTGA CGTTGGCGGG GGGCATGTTT
GTCATGGCCG TGCATATTGC CGCGCCGGTC ATGGCTGCGT TGTTTCTGGT GGAACTGGCG
CTGGCACTCA TGGGGCGCGC GGCACCGCAG ATGAACCTGC TGATGATCGG GTTTCCGCTG
AAGATCGGAG TGGGGTTTCT GTTCATGGGG CTGCTGTTCA CGATCATGCG GCATCAGGTT
CAGGATTTCA TTCTGGGGCT GGGCCCGCAG ATGACCAACA TGCTCAAACT GATCAGCCCG
CTGTAG
 
Protein sequence
MDLFNFDEAS FLSFLLTLMR ISLVVFLLPV FGGNSAPRLV KGALCMVLTL ALWPHLSFSG 
SLLPGHPFGI ALMLAGEIIM GIMLGLLVRF FFAGIQTGGE LLGFQMGFTM VSVADPLSGQ
STSISSHFMY MVSLLIFLVL DGHLVMLKGL TDSFALVPPG QLVFRHASLH NMLTLAGGMF
VMAVHIAAPV MAALFLVELA LALMGRAAPQ MNLLMIGFPL KIGVGFLFMG LLFTIMRHQV
QDFILGLGPQ MTNMLKLISP L