Gene Dde_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0371 
Symbol 
ID3756342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp364717 
End bp366348 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content62% 
IMG OID637781231 
Productdipeptide ABC transporter substrate-binding protein 
Protein accessionYP_386867 
Protein GI78355418 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCCGGT CTCAGGCGTC AGCAAGTGCC CGAAGCGTTC TGCCCGCTCC CCGTTCATAC 
GGGGGGACTC TTGCGGCCGT GGCTTTTGCC TGCGTGCTCG TGTTTTCCGC TCACGGCGCA
GCGGCTGCGG CAACCACAGC CGGGCAGACA GTCACCGTGG CCATGTTCCA GCGCATTGCC
AGTCTGGACC CGGCACACAG CAGCCTGTAC GAACCCCACA GCATCGCTGC CAATGTTTTT
GAAACACTGG TCACCGTTTC GCGCAACGGC ACCGTGCAGC CCGCTGTGGC GGAATCGTGG
AATGTGACGC CCGACGGCAG GCGCTGGACC TTTACCCTGC ATGAAGGCCG CAGCTTTCAC
GACGGTTCTC CCCTGAACGC CTATGCCGTG GAATACAGCT TTCAGCGGCT CATGGATCCG
GCGCACCCGC AGTACACCCC CTATCCCGAC TGGAAACGGC TGCTGTTCGG TCAGGTCAAT
TCCATACGTG CTCTGGATGA CAACACGCTG GAAATAGAAC TGGACAACCC CTATGCCCCG
CTGCTGCATA ATCTGGCAAC GCCCGGTGCC AGCATAGTCT CGCCGCGCTC GCTGCAGGAG
ATGCACGACG GCAGAACCGC CATCCCTGCC GGTTCAGGGC CGTTCCGCGT GGCGTCATAT
TCGCCCGAGG CAGTCACCCT GATACCCGCC GCAGGGCATA CCCCGCCGCC GCGCTGCAAT
GTCCGCTACG AATACTATGC CTCCAGCAGC AGCGCTCTGG AAGCGCTGCT CTCCGGCAGG
GCCGACATTG TACCCGGCCT GACAGAACAG GATGAAAAAA CGGCTCAGCG GCTGGGTGCC
TACACCATCA TCAGACACCC GCAGCTTTCG GTCATTTTTC TGGCCTGCAA CGGTGCCAGT
GAAAAAATGC GCTCCCCCGA AATCCGCCGC GCCGTATCAT TGAGCATCAA CAGAAACAGT
CTGGCCACCG TGGTGCTGGG CGCCAACGGC ATGCCAGCCA CAGGGCTGCT GCCGCCGGAA
ATGTGGGCCA AAGACCATTC GCTGCCTCCG TACGAATACG CGCCGGATAA AGCCCGGCAA
CTTCTGCTTC GCAGCGGCTA CCCGCAGGGC ATCAGCCTTA CGGCGCTGCA GCTCGACGCC
TCACGGCCTT TCATGCCTTC GCCGCGGCTT TTCGCCGTCA CGCTCAAATA TCTCATGGCC
GGAGCCGGCA TAACGCTTTC CATAGAAACC CTGCCCCCCG ATGCTCTGCG GGAACGCCGT
GCACAGGGCG ACTATGATCT GTTCATCAAC GCATGGGTTG CCGATACGGC AGACCCCGAC
AATCTGTACA GCACGCACCT GTATGCAGGA CCTGACAACC CGCTGCACAG GGTACACATA
CCCGAGCTGG ACCGGCTGAT AGAAGAAAGT GTTTCCACCC CCGTACGCGG CGAAAGGGCG
CGGGCCTACC GCCGCATACA GCGTATAGAA CGTGAACAGA TGCCGTGCAT ACCCGTCATG
CACAGCAGCC TGCCGGTCAT ACTGCGCCGC GGAATTTCCG GCATGCGCAT TACCACGGGC
TCGTACCTGA TCTTTCGCAA CACCGTAAAA ACAGCGCCTG CAGACCGCGC TCAGCAACGG
CCGGCACCAT GA
 
Protein sequence
MFRSQASASA RSVLPAPRSY GGTLAAVAFA CVLVFSAHGA AAAATTAGQT VTVAMFQRIA 
SLDPAHSSLY EPHSIAANVF ETLVTVSRNG TVQPAVAESW NVTPDGRRWT FTLHEGRSFH
DGSPLNAYAV EYSFQRLMDP AHPQYTPYPD WKRLLFGQVN SIRALDDNTL EIELDNPYAP
LLHNLATPGA SIVSPRSLQE MHDGRTAIPA GSGPFRVASY SPEAVTLIPA AGHTPPPRCN
VRYEYYASSS SALEALLSGR ADIVPGLTEQ DEKTAQRLGA YTIIRHPQLS VIFLACNGAS
EKMRSPEIRR AVSLSINRNS LATVVLGANG MPATGLLPPE MWAKDHSLPP YEYAPDKARQ
LLLRSGYPQG ISLTALQLDA SRPFMPSPRL FAVTLKYLMA GAGITLSIET LPPDALRERR
AQGDYDLFIN AWVADTADPD NLYSTHLYAG PDNPLHRVHI PELDRLIEES VSTPVRGERA
RAYRRIQRIE REQMPCIPVM HSSLPVILRR GISGMRITTG SYLIFRNTVK TAPADRAQQR
PAP