| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0360 |
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| Symbol | |
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| ID | 3756331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 348717 |
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| End bp | 350666 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637781220 |
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| Product | lipopolysaccharide biosynthesis protein (WbpM)-like |
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| Protein accession | YP_386856 |
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| Protein GI | 78355407 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATAG CACTGCGCAC CGCCAACTTC TACATCATGA TGTGCGTGGA CCTGCTGTGC
TTTGCAGCCG CGCTGTACGC CGCCTATATG CTGCGGTTCG ACTTTTCCAT TCCCTATCTG
CATGTCGAAC GCATGAAAGG ACTGCTGCCA TGGGTACTGC CCATGAAGCT CGCCGTGTTC
GTGGTATTTT CCATGTACCG CGGCATGTGG CGCTACACCA GCCTGCGCGA CTCCATACTG
CTGCTGCGCG CCGCAAGCGT GCAGAGCCTG CTTGTCATCG CAGGGGTGGC ATACCTTACC
GGATTTGCGG GCTATTCACG CGCCGTCTTC GGCATGGACT TTCTGCTTAC CTTTCTGTTC
ACCGGCGGCG CGCGTCTGGG TATCCGCATT CTGTTCTCCC TGCGCGAGAC AGGGCGCTTC
TGGCTGCCCA TGACGGGCCG CACCGCGCGC AAGGGAGCCA GAAGGGTCAT CATAATCGGC
GCCGGCAGAG CCGGAGAACG GCTGGTCAGC GAACTGAACC GTGATGTGTC GCTGGGCTAC
TTCCCCGTGG GGTTCGTGGA CAACAACCCC GCCCTGAAAG GCAGAACCAT CCACGGCCGT
CCCGTCATGG GCACGCTGGA CCGCCTGCCC GAAGCCATTG TCTCCACCCG TGCCGAAGAA
CTGCTCATCG CCCTTACGGA AGCTTCTTCC GAGCAGGTGC GCCACATAGT GCAGGCCTGT
TCGGAAACGG GTCTGCCCTG CAAAATACTG CCGCCCATGA ACGAAATTCT GGATTTCAAA
CGCGGCATAA AAAACATGCG CGAGGTCAAC TACCTCGACC TGCTGGGCCG GTCGCCGGTG
GAACTGGATA CCGGAGCCAT CAGCCGCTAC CTGCAGGGCA AATGCATTCT GGTCACCGGC
TGCGGCGGCT CCATAGGATC AGAGCTGGTC AGGCAGATTA TCCGGTATGC TCCCGCCCGT
CTGGTGCTGG TGGATGCCAG CGAATTCAAT CTGTATAAAA TACAGATGGA TCTTGAACAC
GTACACGGCT TTCACGACTA TGTGGCCATA CTGGGCAATA TCCGCGATGC CCACCTGATG
CGCACCACAT TTGCCGCACA CAAACCAGAG GCTGTCTTCC ACGCCGCGGC GTACAAGCAT
GTGCCCATGC TTGAGCGTAA CCCGTGGCAG GCCGTGCAGA ACAATATTCT GGGCACCCAG
ACACTCATGC AGGCCGCCCA CGATGCCGGA GTGCAGCGTT TTGTGGTGGT CTCCACCGAC
AAGGCGGTAC GCCCCACCAA CGTCATGGGG GCTTCCAAGC GGGTAACAGA ACTGCTCATG
CGCAGGTTCT CCGGCAGTTC CACACGGTTT ATGGCCGTGC GCTTCGGCAA TGTGGTCGGG
TCGTCCGGCT CCGTTGTGCC GCTGTTTCTC GACCAGATTG CCAGAGGCGG CCCCGTCACG
GTCACGCATC CCGAAGTAAC CCGATACTTC ATGTCCATTG CCGAAGCCGC GCAGCTTATT
CTGCAGGCGG GCACCATGGC GCAGGGCGGC GAGATATTTG TGCTGGATAT GGGGGTACCT
GTCAAAATAG CAGATATGGC CAAAGACCTT ATCCGCCTTG CCGGACTGGA ACCCGAAGTG
GATATTCCCA TTGTCTTCAC CGGCCTGCGC GAAGGTGAAA AACTGTACGA AGAGCTGATT
ACCGCTGACG AAGGCGTGGT GCGCACCGAG CATGACAAGA TTATGGTGCT GCGCTGCTGT
GACAGCGCCC AGATATCTGA AAGCGCCCTG CAGACTCTGG AACAGGGCCT GCAACAGGCC
GTGCAGGCAG CACAGGCGCA CGACGGTGCA GCAGTGCGCA GAGCGCTGCA TGTGCTGGTG
CCCGAATACA CCGAAGTTGA ACATACGCAC ACAGAGACCG GCGCGTCTGG CGCGCCGGAA
CCTGCCGCAC TCCGGCCGGA ACCTGCGTGA
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| Protein sequence | MRIALRTANF YIMMCVDLLC FAAALYAAYM LRFDFSIPYL HVERMKGLLP WVLPMKLAVF
VVFSMYRGMW RYTSLRDSIL LLRAASVQSL LVIAGVAYLT GFAGYSRAVF GMDFLLTFLF
TGGARLGIRI LFSLRETGRF WLPMTGRTAR KGARRVIIIG AGRAGERLVS ELNRDVSLGY
FPVGFVDNNP ALKGRTIHGR PVMGTLDRLP EAIVSTRAEE LLIALTEASS EQVRHIVQAC
SETGLPCKIL PPMNEILDFK RGIKNMREVN YLDLLGRSPV ELDTGAISRY LQGKCILVTG
CGGSIGSELV RQIIRYAPAR LVLVDASEFN LYKIQMDLEH VHGFHDYVAI LGNIRDAHLM
RTTFAAHKPE AVFHAAAYKH VPMLERNPWQ AVQNNILGTQ TLMQAAHDAG VQRFVVVSTD
KAVRPTNVMG ASKRVTELLM RRFSGSSTRF MAVRFGNVVG SSGSVVPLFL DQIARGGPVT
VTHPEVTRYF MSIAEAAQLI LQAGTMAQGG EIFVLDMGVP VKIADMAKDL IRLAGLEPEV
DIPIVFTGLR EGEKLYEELI TADEGVVRTE HDKIMVLRCC DSAQISESAL QTLEQGLQQA
VQAAQAHDGA AVRRALHVLV PEYTEVEHTH TETGASGAPE PAALRPEPA
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