Gene Dde_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0354 
Symbol 
ID3756364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp344447 
End bp344776 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content52% 
IMG OID637781214 
Productflagellar hook-basal body complex protein (FliE) 
Protein accessionYP_386850 
Protein GI78355401 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTC AGAGTGTCGG CCTGAAGGCC TACAGCAACG CGCTGTCAAA CTTTACCAAG 
GCAGAACGCA GCATCCAGTC GGGCAAACTG ACGCCGGAAC CGAGAGTGGA GCGCTCCTTC
AGCGACACCA TCAACTCTTC GGTAAAAAAA GTGAACGACA TGCAGAGCGA AAAAAGCACC
ATGATCCAGT CGTTCGCCTC CGGCGAAACA CAGAACGTGC ACGAACTGAT GATAACGCTG
CAAAAGGCCA GTGTTGCCGT AAAAATGACA TCCGCAGTAC GCAACAAAGT GATGGAAGCG
TACCGCGAAC TGAGCAAAAT GCAGTTCTAA
 
Protein sequence
MTIQSVGLKA YSNALSNFTK AERSIQSGKL TPEPRVERSF SDTINSSVKK VNDMQSEKST 
MIQSFASGET QNVHELMITL QKASVAVKMT SAVRNKVMEA YRELSKMQF