Gene Dde_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0315 
Symbol 
ID3756403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp305227 
End bp306396 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content62% 
IMG OID637781175 
Productaminodeoxychorismate lyase 
Protein accessionYP_386811 
Protein GI78355362 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA ACCCGCAGCA GGAACCGGCA GAACGGCATC CGGCGGCATC TTCCGCAGAT 
GGTGCGCCGG AGCAGGACAA CTCGGATGCG GCTCGCGGCG GTGCTGTGCG CCTGCGGCGC
AGATTGCGCG TGCTGCCTGC CGCGGCGCTG GCGTTGCTGC TGGCCGTGGC GGTCTATGTG
GTTCTGGATG CGTGGATGTT CATGACCACG CCGCCGGAAA AGAACGGGCG CGATGTGACC
GTGCAGATAC GGCCCGGTTC GACGTTTATC CGTGTGGCGT GGCAGCTCAG GCAGGCCGGA
GCCATAACGG ATGTGACGCG GTTCCGTCTG CTGGGCATGT ACAGAAAGCA GACCGGAGCC
GTACACGCGG GAGAATTTCT GGTGAATACC GGCTGGACCC CCGGCAGGGT GCTGGACGCC
GTGGTGAACG GCACGCCGGT GGTTCATCCG CTGGCGCTGC GCGAAGGTTT GCCGTGGTGG
GAGGTGGCCC GTCTGGTGGA ACAGGGCGGT TTTGCCCGGT ATGAAGATTT CAGGGCGGTT
ATCCACGATC CGGAATTTCT CGGGCACTGG AAAATCCCTT TCGATTCTGC AGAGGGCTAC
CTTTTTCCGG AAACGTACAT GCTGCAGCGT CCGCCGGAGA TGAACAGGGC TTCCGCCCGT
GCCGTGGCGG ATATGCTGGT GAGTATGTTC TACCGTAAGT CTGCATTGCT GTGGTCCGTA
CAAGCGCCGG AACACGAAGC CGGTGTCCGG CAGGATGAAC CTCAGCCGGA AGAGCTGGGA
AGGCTGGTCA TTCTCGCCTC GCTGGTGGAA AAAGAAACCG GACTGCCTTC CGAACGCGAG
CGCATAGCCG GTGTGTATGC CGCGCGCCTG AGGCGGGGCA TGCTTATGCA GTGTGACCCC
ACTGTCATCT ACGGGCTTGG AGAATCCTTT GACGGCAACC TGACCCGCAC TCATCTGCGC
GATGCGGAAA ATCCCTATAA TACCTACCGG CATAAAGGCC TGCCGCCGGG CCCTATCTGT
TCTCCGGGGC TGGATTCCCT TGCCGCGGCG CTGCGGCCGG AACAGCACAA CTATCTGTAT
TTTGTCTCGC GCGGCGACGG CTCTCATCAT TTCAGCAGTA CGCTGACAGA GCATAACCGC
GCAGTACGCA AGTATCAGCT GGGCAGATAG
 
Protein sequence
MNENPQQEPA ERHPAASSAD GAPEQDNSDA ARGGAVRLRR RLRVLPAAAL ALLLAVAVYV 
VLDAWMFMTT PPEKNGRDVT VQIRPGSTFI RVAWQLRQAG AITDVTRFRL LGMYRKQTGA
VHAGEFLVNT GWTPGRVLDA VVNGTPVVHP LALREGLPWW EVARLVEQGG FARYEDFRAV
IHDPEFLGHW KIPFDSAEGY LFPETYMLQR PPEMNRASAR AVADMLVSMF YRKSALLWSV
QAPEHEAGVR QDEPQPEELG RLVILASLVE KETGLPSERE RIAGVYAARL RRGMLMQCDP
TVIYGLGESF DGNLTRTHLR DAENPYNTYR HKGLPPGPIC SPGLDSLAAA LRPEQHNYLY
FVSRGDGSHH FSSTLTEHNR AVRKYQLGR