Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0315 |
Symbol | |
ID | 3756403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 305227 |
End bp | 306396 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637781175 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_386811 |
Protein GI | 78355362 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGAGA ACCCGCAGCA GGAACCGGCA GAACGGCATC CGGCGGCATC TTCCGCAGAT GGTGCGCCGG AGCAGGACAA CTCGGATGCG GCTCGCGGCG GTGCTGTGCG CCTGCGGCGC AGATTGCGCG TGCTGCCTGC CGCGGCGCTG GCGTTGCTGC TGGCCGTGGC GGTCTATGTG GTTCTGGATG CGTGGATGTT CATGACCACG CCGCCGGAAA AGAACGGGCG CGATGTGACC GTGCAGATAC GGCCCGGTTC GACGTTTATC CGTGTGGCGT GGCAGCTCAG GCAGGCCGGA GCCATAACGG ATGTGACGCG GTTCCGTCTG CTGGGCATGT ACAGAAAGCA GACCGGAGCC GTACACGCGG GAGAATTTCT GGTGAATACC GGCTGGACCC CCGGCAGGGT GCTGGACGCC GTGGTGAACG GCACGCCGGT GGTTCATCCG CTGGCGCTGC GCGAAGGTTT GCCGTGGTGG GAGGTGGCCC GTCTGGTGGA ACAGGGCGGT TTTGCCCGGT ATGAAGATTT CAGGGCGGTT ATCCACGATC CGGAATTTCT CGGGCACTGG AAAATCCCTT TCGATTCTGC AGAGGGCTAC CTTTTTCCGG AAACGTACAT GCTGCAGCGT CCGCCGGAGA TGAACAGGGC TTCCGCCCGT GCCGTGGCGG ATATGCTGGT GAGTATGTTC TACCGTAAGT CTGCATTGCT GTGGTCCGTA CAAGCGCCGG AACACGAAGC CGGTGTCCGG CAGGATGAAC CTCAGCCGGA AGAGCTGGGA AGGCTGGTCA TTCTCGCCTC GCTGGTGGAA AAAGAAACCG GACTGCCTTC CGAACGCGAG CGCATAGCCG GTGTGTATGC CGCGCGCCTG AGGCGGGGCA TGCTTATGCA GTGTGACCCC ACTGTCATCT ACGGGCTTGG AGAATCCTTT GACGGCAACC TGACCCGCAC TCATCTGCGC GATGCGGAAA ATCCCTATAA TACCTACCGG CATAAAGGCC TGCCGCCGGG CCCTATCTGT TCTCCGGGGC TGGATTCCCT TGCCGCGGCG CTGCGGCCGG AACAGCACAA CTATCTGTAT TTTGTCTCGC GCGGCGACGG CTCTCATCAT TTCAGCAGTA CGCTGACAGA GCATAACCGC GCAGTACGCA AGTATCAGCT GGGCAGATAG
|
Protein sequence | MNENPQQEPA ERHPAASSAD GAPEQDNSDA ARGGAVRLRR RLRVLPAAAL ALLLAVAVYV VLDAWMFMTT PPEKNGRDVT VQIRPGSTFI RVAWQLRQAG AITDVTRFRL LGMYRKQTGA VHAGEFLVNT GWTPGRVLDA VVNGTPVVHP LALREGLPWW EVARLVEQGG FARYEDFRAV IHDPEFLGHW KIPFDSAEGY LFPETYMLQR PPEMNRASAR AVADMLVSMF YRKSALLWSV QAPEHEAGVR QDEPQPEELG RLVILASLVE KETGLPSERE RIAGVYAARL RRGMLMQCDP TVIYGLGESF DGNLTRTHLR DAENPYNTYR HKGLPPGPIC SPGLDSLAAA LRPEQHNYLY FVSRGDGSHH FSSTLTEHNR AVRKYQLGR
|
| |