Gene Dde_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0254 
Symbol 
ID3755075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp236496 
End bp237542 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID637781114 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_386750 
Protein GI78355301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGG AACGTTTGGT CGTTGCGGTT GTAGGTGCCA CGGGTGCTGT GGGCCGCGAA 
ATGCTGAAGA CGCTGGAAGA TCGTGAATTT CCCGCTCATG AGGTGCGCGC GCTGGCCTCT
GCCCGCAGCG CAGGAACCAC CGTACCCTTC AAGGGTGGCG AGCTCACCGT GCGCGAACTT
ACCGAAGACT CCTTTGAAGG TGTTGATATC GCATTGTTTT CTGCAGGCGG CGGCACTTCG
GCCCGGTTTG CCCCCCATGC CGTGAAATCC GGCTGCGTGG TGGTGGACAA CTCCAGCAAC
TGGCGCATGG ATGAGCGCTG CCCGCTGGTG GTGCCCGAGG TGAACCCCGA CGCCCTCAAG
CTGCACAACG GCATCATTGC CAACCCCAAC TGCTCGACCA TCCAGATGGT TGTGGCCCTC
AAGCCTCTGC ATGATGCGGC AGGCGTACGC CGCGTGGTGG TTTCCACCTA TCAGGCTGTT
TCCGGTACCG GCCAGAAGGC CATATCCGAA CTGGAAAAAC AGGTGCGGCA GATGTTTAAC
ATGCAGGAGC CCGAAGCTTC GGTCTATCCG TATCAGATAG CGTTCAACTG TCTGCCGCAC
ATCGATGTTT TCCTTGAAGA CGGCTACACC AAGGAAGAAC TGAAGATGGT GCAGGAAACC
GTGAAGATAA TGGGCGACCC GTCGGTGAAG GTTACCGCCA CCACCGTGCG CGTGCCGGTT
TTTTACGGCC ATTCCGAATC GCTGAACATC GAAACGGAGA AAAAACTGAC CGCGGCGCAG
GCCCGCGCCG TGCTGGCGCA GGCTCCCGGC GTGCGTGTAC TGGATAATCC TTCGGAAAAT
ATCTACCCCA TGGCCATTCA TGCCGCAGGT GAGGATGAAA CCTTTGTCGG GCGCATCCGT
GAAGACCATA CCATTGAAAA CGGTCTGAAC ATGTGGGTGG TGGCTGACAA CCTGCGCAAA
GGCGCCGCAC TTAATGCCGT ACAGATTGCC GAAGAACTGG TGGAGCGTTC TCTGCTGGAT
ATCGCCGATC CCGGAAAATT CCTGTAA
 
Protein sequence
MSKERLVVAV VGATGAVGRE MLKTLEDREF PAHEVRALAS ARSAGTTVPF KGGELTVREL 
TEDSFEGVDI ALFSAGGGTS ARFAPHAVKS GCVVVDNSSN WRMDERCPLV VPEVNPDALK
LHNGIIANPN CSTIQMVVAL KPLHDAAGVR RVVVSTYQAV SGTGQKAISE LEKQVRQMFN
MQEPEASVYP YQIAFNCLPH IDVFLEDGYT KEELKMVQET VKIMGDPSVK VTATTVRVPV
FYGHSESLNI ETEKKLTAAQ ARAVLAQAPG VRVLDNPSEN IYPMAIHAAG EDETFVGRIR
EDHTIENGLN MWVVADNLRK GAALNAVQIA EELVERSLLD IADPGKFL