Gene Dde_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0152 
Symbol 
ID3755303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp138936 
End bp140654 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content58% 
IMG OID637781011 
ProductDEAD/DEAH box helicase-like 
Protein accessionYP_386648 
Protein GI78355199 
COG category[K] Transcription
[J] Translation, ribosomal structure and biogenesis
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA AAGAGGCAGC CCTCCGGCAA AAAAAGGGCG TTTCTGCTTG CAATGGCAGA 
AACATCCGGC TCTGCCGCAG CGTTGTCATA ACGCGATGCC GAAAGACGCA TGGCAAGGAA
ACATACAAGA TAATGGTTGA AAAACTTCTT TTCGCAGATC TTCCCCTTTC TAAGGAAGTG
CTGCGCGCGA TACAGGACAT GGGCTTTGAG GAGGCGTCTC CCATCCAGAC GATGTCCATC
CCGCACATAC TGGCGGGTAA GGATGTGGTC GGACAGGCCC AGACAGGCAC GGGCAAGACT
GCTGCGTTCG GCATTCCCAT TCTCGAGCGC ATTGACCCCC GTGATAAAGC CACGCAGGCC
GTGGTGCTGT GTCCTACGCG TGAACTGGCC ATTCAGGTGG CCGAAGAAGT GACTACACTG
GCCCGCCACA AGCGGGGCAT CAGTGTTGTT CCCGTATACG GCGGACAGCC CATCGAACGG
CAGGTCCGCG CTCTGCGCCG TGGTGCGCAG GTTATCGTGG GTACGCCGGG CCGCGTGATG
GACCACCTCG ACAGAGGAAC CATGGACATC AATACCGTGA AAATGGTTGT GCTGGACGAG
GCGGACGAAA TGCTCGATAT GGGCTTCCGC GATGACATTG AATTCATTCT GGGCAAGATG
GAGCAGGAAG TACAGACCGT GTTCTTTTCC GCCACCATGC CCCGCGCCAT TCTGGATATG
GCGCAGCGCT ACCTCAAGGA ACCGGAGTTC CTGAAAGTCA CCCAGAAGCT GCTTACCGTG
CCCAGCATCG AGCAGATATA CTTCGAGGTG CGTCCTTTCC AGAAGCTGGA AAGTCTGTGC
CGTGTGCTGG ACGTGTATAA TCCCAAGCTG ACCATCGTGT TCTGCTCCAC CAAGGTGGGC
GTGGACGAAC TGGCAACCAA TCTGCAGGCC CGCGGATATG ATGCCGACGG ACTGCACGGC
AACCTGAATC AGGCCCAGCG CGACAGGGTG ATGAACCGCT TCCGCAAAGG AAACATTGAT
ATTCTGGTGG CCACCGACGT GGCTGCCCGC GGTATTGATG TGGAAAACGT GGAAGCCGTG
GTCAACTACG ACATACCCAA CGATGTGGAA AGCTATGTGC ACCGTATCGG CCGTACGGGC
CGTGCGGGCC GTGCGGGCCG TGCATTCACC TTTGTGTCCG GCCGCGAATT CTACAAGCTG
CGCGACATCA AGCGCTTTAC CAAGGCGCAG ATAGCACAGC GTCAGGTACC CTCGCTTTCC
GAAGTGGAAA ACGCCAAATT CACCCAGATG CTCAATGAAG TGACCAACCA GATACGCACC
GGCGGTCTGG AGCGCTACAT AGAACTGGTG GAAGGCATTA TCGGCGAAGA GTTCACCTCT
GTGGAAGCTG CCGCCGCCCT GCTGCGCATG ATGATGCACC GTAACGCAGG CGATGCCGTG
ACCGAAGAGC AGAAGTTCGG TGATACCGGT GCCCAGCCGG GCATGGTACG CCTGTTCTTT
AACGTGGGCC GCAAAGCCCG CGTGACGGCA CGTGACTTTG TGGGGGCCAT TGCCGGAGAA
ACCGGCCTGC CCGGACGGAT GATCGGCTCC ATAGATATCT ATGACCGGTT CACGTTTGTG
GAAGTGCCCA ACGAGTTTGC CGCAGAAGTG CTTGCAGTGA TGAACGGCAA CCAGATACGC
GGCAACAAGC TTGCCGTGGA ACCTGCCAGC CGCCGCTGA
 
Protein sequence
MESKEAALRQ KKGVSACNGR NIRLCRSVVI TRCRKTHGKE TYKIMVEKLL FADLPLSKEV 
LRAIQDMGFE EASPIQTMSI PHILAGKDVV GQAQTGTGKT AAFGIPILER IDPRDKATQA
VVLCPTRELA IQVAEEVTTL ARHKRGISVV PVYGGQPIER QVRALRRGAQ VIVGTPGRVM
DHLDRGTMDI NTVKMVVLDE ADEMLDMGFR DDIEFILGKM EQEVQTVFFS ATMPRAILDM
AQRYLKEPEF LKVTQKLLTV PSIEQIYFEV RPFQKLESLC RVLDVYNPKL TIVFCSTKVG
VDELATNLQA RGYDADGLHG NLNQAQRDRV MNRFRKGNID ILVATDVAAR GIDVENVEAV
VNYDIPNDVE SYVHRIGRTG RAGRAGRAFT FVSGREFYKL RDIKRFTKAQ IAQRQVPSLS
EVENAKFTQM LNEVTNQIRT GGLERYIELV EGIIGEEFTS VEAAAALLRM MMHRNAGDAV
TEEQKFGDTG AQPGMVRLFF NVGRKARVTA RDFVGAIAGE TGLPGRMIGS IDIYDRFTFV
EVPNEFAAEV LAVMNGNQIR GNKLAVEPAS RR