Gene Dde_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0129 
Symbol 
ID3756577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp120907 
End bp121878 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content58% 
IMG OID637780987 
Product2-keto-3-deoxygluconate permease 
Protein accessionYP_386625 
Protein GI78355176 
COG category 
COG ID 
TIGRFAM ID[TIGR00793] 2-keto-3-deoxygluconate transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG TTCCCATCGT TGACTGGCTG CAGCGGCTGC CCGGCGGCAT GATGCTGGTG 
CCCCTCATTC TGGGTTCGGT CACAGGCACA TTTTTTCCCG GATTTCTGGG GCTGGGGTCG
TTTACCACCG CCTTGTTCAA AAACAGCGCA CTGCCGCTCA TCGGTCTGCT CATACTGGCC
ACGGGCGCCC AGATAAACGC CAGACAAAGC ACGGGCGTTT TCAAGCGCTG CGGGGTCCTG
CTGCTTACCA AAACGTTCAT TCCTGCCGTC ATTATCATTC TGTACGGCAA CATCTTCGGA
CGCGAAGGCA TTCTGGGCGT ATCGCTGCTG GCCGCCATGA TAGCCTTCAC CAACTCCAAC
GGCGGTCTGT GGCTGGCCCT TACCGGACAG TACGGCACAG ATGAGGACCG CGGCGCCTAC
ATTGCCAGCG GCCTTAACGA CGGGCCTTTT TTCATTCTGC TGGCGCTGGG CCTTTCCGGA
CATGCCAACG TACCGTGGCA GGCCATCGTG GGAACGGTCA TTCCCTTTAT TGTCGGTTTT
GTACTGGGTA ATCTGGACAA AAAGTTTGCC GAAATGATGA AGCCCACTGC AGCCATTACC
ATTCCGTTTT TCGCCTTTGC GCTGGGCACG GGCATAAACC TGCAAAACCT TGTGACAGGC
GGCGTCACAG GCGTGCTGCT GGGCATAGGT GTAACGCTGG TCACGGGTTT TCTGTGCTTT
GCCGGCTACA GGCTGTTCAT CCGCAACTCC AATCCGGGCA TAGGCTTTGC TGCGGGAACC
ACTGCGGGCA ACTCCATCAC CAGCGTTCTT GTGGTGGTGC AGGCCGACCC CTCGTATGCG
CCTTTTCAGG CGGTGGCCAC CGCACAGGTT GCAGCGGCGG TGCTGGTAAC AGCCATACTG
TGCCCGCTGA TGACGCACTA TATGTGCAAG CGCTATGATG CTGCACATCC CCCGCAGGAG
CAGCGCGCAT GA
 
Protein sequence
MKQVPIVDWL QRLPGGMMLV PLILGSVTGT FFPGFLGLGS FTTALFKNSA LPLIGLLILA 
TGAQINARQS TGVFKRCGVL LLTKTFIPAV IIILYGNIFG REGILGVSLL AAMIAFTNSN
GGLWLALTGQ YGTDEDRGAY IASGLNDGPF FILLALGLSG HANVPWQAIV GTVIPFIVGF
VLGNLDKKFA EMMKPTAAIT IPFFAFALGT GINLQNLVTG GVTGVLLGIG VTLVTGFLCF
AGYRLFIRNS NPGIGFAAGT TAGNSITSVL VVVQADPSYA PFQAVATAQV AAAVLVTAIL
CPLMTHYMCK RYDAAHPPQE QRA