Gene Dde_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0127 
Symbol 
ID3756445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp118545 
End bp119558 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID637780985 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_386623 
Protein GI78355174 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTGC CTGTTTTAGC GCTGACCATG GGTGACCCTG CGGGAATCGG ACCGGAAATA 
ACAGCCAAGG CCCTCGGACG CGATGAAATT CACACCATGT GCATACCGCT TGTGGTGGGC
GATATGGCGC TTATGCAGGC GCACGAACGA TATATGAACG GCCGCAGGTG CATACTTGTG
GACGGAGTGG AAGCGCTGGA TACGCTGCCT GCTGACGGTG TGGCCGTTTT TCAGCCGCAC
GGACCTTTAC GCGGCGTTGT GGCGGGTACG CTGTCAGCGG AAGCAGGCCG CGCAGCTGCG
GCCTATGTGT ACGGAGCCAT AGAACTGGCC AAACGCGGCG ACATTCAGGG CATAGTGACT
GCCCCGCTGA ACAAGGAAGC GCTGCATATG GGCGGCGACA CCCACCCCGG ACACACGGAA
CTGCTGGCAG AAAGCTTCGG AGTGCGCAAC TATGCCATGG TGCTGGCCGC GGAAGACAGA
TATGTGTTTC ATGTGACCAC ACATCAGTCG CTGCGTTCCG CCATTGATTC ACTTACCGTG
GATGCCGTGT ACCAGCGCAT CAGGCTGGCC CATCTGCTGG CGACGGCACT GGGCACACCG
CAGGAGACGG TGGCAGTGGC CGGAGTCAAT CCGCACGCCG GAGAAGGCGG CATGTTCGGC
ACGGAAGAAC GCGACATCAT AACCCCCGCT GTACAGAAGG CCGTGGCGGA GGGCATACCG
GCTGAAGGTC CGGTTCCGGC CGATGTGCTG TTCCCGCGCA TGGTACGCGG TCAGTACCGG
TTTGCCATCG CCATGTATCA CGATCAGGGG CACGCCGTTT TCAAATCGCT GTATTTCGAC
ACCGGCGTCA ACATCACCAT AGGGCTGCCG GTCATCCGCA CCTCTGTTGA CCACGGCACG
GCCTTTGATA TTGCGGGCAA AGGCATTGCC AGCGAAGAAA GCATGATCGA AGCGGTCCGC
GCAGCAGCCC GTCTGGGCAA CAGCTGGGCA CATATAAGCC GCAGCGCCAT GTGA
 
Protein sequence
MKLPVLALTM GDPAGIGPEI TAKALGRDEI HTMCIPLVVG DMALMQAHER YMNGRRCILV 
DGVEALDTLP ADGVAVFQPH GPLRGVVAGT LSAEAGRAAA AYVYGAIELA KRGDIQGIVT
APLNKEALHM GGDTHPGHTE LLAESFGVRN YAMVLAAEDR YVFHVTTHQS LRSAIDSLTV
DAVYQRIRLA HLLATALGTP QETVAVAGVN PHAGEGGMFG TEERDIITPA VQKAVAEGIP
AEGPVPADVL FPRMVRGQYR FAIAMYHDQG HAVFKSLYFD TGVNITIGLP VIRTSVDHGT
AFDIAGKGIA SEESMIEAVR AAARLGNSWA HISRSAM