| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0116 |
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| Symbol | |
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| ID | 3756434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 108514 |
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| End bp | 110181 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637780974 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_386612 |
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| Protein GI | 78355163 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGCA AGAAAATGAC ACACGGGCTT GAAAAAGCCC CGCATCGTTC GCTGCTGTAC
GCCCTGGGCC TGACCCGTGA AGAATTGTCC AGACCGCTTG TGGGGGTGGT CAATTCCGCC
AACGAGGTGG TACCGGGACA CATCCACCTG CACACCATTG CCGAAGCAGT GAAGGCCGGA
GTGCGCGCCG CGGGTGGCAC ACCCATGGAG TTTCCCGCCA TAGCGGTATG CGACGGGCTG
GCCATGAACC ATGAAGGCAT GCGTTTTTCG TTGCCCAGCC GCGAAATCAT TGCAGATTCC
ATTGAGATAA TGGCCACGGC TCATCCTTTT GATGCGCTGG TCTTCATACC CAACTGTGAT
AAGTCGGTTC CCGGCATGCT TATGGCCATG CTGCGTATGA ACGTGCCGTC CATTCTTATC
AGCGGCGGCC CCATGATGGC AGGCACGGGC AACGGCAAGG CCGCAGACCT CATCACCGTA
TTTGAAGGTG TGGGCATGGT GCGGCAGGGC AGAATGACGG AAGACGAACT GGAGCAGCTT
TCCGAGACGG CATGTCCCGG CTGCGGGTCG TGCGCGGGCA TGTTCACGGC AAACTCCATG
AACTGTCTTT CCGAAACCAT AGGGCTTGCG CTGCCGGGCA ACGGTACCAC GCCGGCCAAT
TCCGCAGCGC GGGTGCGGCT GGCCAAACAT GCCGGCATGC GCGTCATGGA GCTGCTGGAG
CGCGATATAA AGCCGCGTGA TATCGTGACC GAAAAGGCCG TGGCCAACGC TGTTGCCGCG
GATATGGCGC TGGGCTGTTC CACAAACACG GTACTGCATC TGCCCGCTGT ATTTGCCGAG
GCAGGGCTTG ATCTTACTCT GGGCATTTTT GACGAGGTAA GCCGCAAGAC CCCCAACCTG
TGCAAGCTCT CGCCCGCCGG TGACCAGCAT ATACAGGACC TGCACCGTGC AGGGGGTATT
CCCGCGGTCA TGGCCGAACT GGACAAGGCC GGGCGCATAC ACCGCGACGC ACTGACCGTC
ACAGGCCGTA CCGTGGGCGA AAACCTTGAT GCACTGGGCG CCGCGGTGCG TGACCACGAT
GTCATCAGGC CCATGGAAAA GCCGTATTCG CCGCAGGGCG GTATTGCCAT TCTGTACGGT
TCGCTTGCGC CGGAAGGGGC CGTGGTCAAG CAGTCTGCCG TTGCACCGGA AATGATGCAG
CGTACAGCGC GTGCCCGTGT GTTTGAATCA GAAGAAGCTG CCTTTGAAGC CATTATGGCG
CAGCGGATTG AAAAGGGCGA TGCCATCATC ATACGCTACG AAGGGCCGAA AGGCGGTCCC
GGTATGCGCG AAATGCTGTC TCCCACCGCA GCCATTGCCG GCATAGGGCT GGGGGCCGAT
GTGGCGTTGA TTACCGACGG GCGTTTTTCC GGCGGAACCA GAGGTGCCGC CATAGGGCAT
GTATCACCCG AAGCTGCTGA CGGCGGTCCC ATAGGGCTGG TGCGTGAAGG GGACATGATC
GAGATAGACA TCCCCGCCCG CAAGCTGGAC CTGCTGGTTG ACGAAGCGGA AATGGAGCGC
CGGCGTGCTG CATTTACGCC CGTGGTGAAA GAGGTCACCT CTCCGCTGCT GAAACGCTAC
AGCCGTCTGG TGACGTCTGC CGCCAACGGT GCCGTGTACA AGCGCTGA
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| Protein sequence | MRSKKMTHGL EKAPHRSLLY ALGLTREELS RPLVGVVNSA NEVVPGHIHL HTIAEAVKAG
VRAAGGTPME FPAIAVCDGL AMNHEGMRFS LPSREIIADS IEIMATAHPF DALVFIPNCD
KSVPGMLMAM LRMNVPSILI SGGPMMAGTG NGKAADLITV FEGVGMVRQG RMTEDELEQL
SETACPGCGS CAGMFTANSM NCLSETIGLA LPGNGTTPAN SAARVRLAKH AGMRVMELLE
RDIKPRDIVT EKAVANAVAA DMALGCSTNT VLHLPAVFAE AGLDLTLGIF DEVSRKTPNL
CKLSPAGDQH IQDLHRAGGI PAVMAELDKA GRIHRDALTV TGRTVGENLD ALGAAVRDHD
VIRPMEKPYS PQGGIAILYG SLAPEGAVVK QSAVAPEMMQ RTARARVFES EEAAFEAIMA
QRIEKGDAII IRYEGPKGGP GMREMLSPTA AIAGIGLGAD VALITDGRFS GGTRGAAIGH
VSPEAADGGP IGLVREGDMI EIDIPARKLD LLVDEAEMER RRAAFTPVVK EVTSPLLKRY
SRLVTSAANG AVYKR
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