Gene Dde_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0079 
Symbol 
ID3755237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp68277 
End bp69425 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content59% 
IMG OID637780932 
Producttryptophan synthase subunit beta 
Protein accessionYP_386575 
Protein GI78355126 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGATT CGCTCAAACC CATTCTGGAC GAGCTTGCCG CCACGTTTGA ACGGTACAGA 
AACGACCCCG GGTTTCTGGA GGAATTCAAC TACTACCTTA CCCGCTACTC GGGCCGCGAG
ACACCGCTGT ATCTTTGTGC CAATCTGACA CGGCGCCTCG GCGGGGCCAA AATATATCTC
AAGCGCGAGG ATCTGAACCA TCTGGGTGCC CATAAGGTCA ACAACACCAT CGGGCAGATT
CTGCTGGCCA AGCGCATGGG CAAAAAGAAA ATCATCGCCG AAACAGGTGC CGGACAGCAT
GGCGTGGCCA CTGCGGCGAC AGCCGCGCTG ATGGGCATGG AGTGCACCAT ATATATGGGG
GCGGAAGACG TGGAGCGTCA GAAGCTCAAT GTGTTCCGCA TGCAGATGAT GGGAGCCCGA
GTGGTTCCCG CAACAAGCGG CCAGCAGACT CTTAAGGAAG CCGTCGACGA AGCTCTTGCC
GCCTGGATAC GCGAAGCCGA TACAACGTTC TATCTGCTGG GTTCGGCCGT GGGGCCGCAT
CCCTTCCCGC TTATGGTACG AGAATTCCAG TCCGTCATAG GGCGTGAGCT GCGGGCCCAG
ATGCTGGAAG CCGAAGGCCG TCTGCCGGAT TACTGCATCG CCTGCGTGGG CGGCGGTTCC
AATGCCATCG GCATGTTTTC CGGTTTCATC AATGATGACG GCGTGCGTCT TGTGGGGGTG
GAACCGGCGG GCCGCGGGCT TGAATACGGT GACCACGCCG CCACGCTGTG CTTAGGTGAA
CCGGGTGTCA TGCATGGCTT TAATTCATAT ATGCTGAAGG ATCAGGCAGG AGAGCCTGCG
GCCGTGTACT CCATTTCCGC CGGGCTGGAC TATCCCGGAG TGGGACCCGA GCACAGCCAC
CTTAAAGATC TGGGCCGTGC GGAATATGTA AATGCCAGCG ATGCGGAGGC CCTCAGCGCA
TTTTTCGATC TGTCGCGTAC AGAAGGCATC ATACCTGCGC TGGAGTCAGC CCACGCACTG
GCATACGCCA TGCGTCTTGC GCCGACCCTG TCTTCCGACA AGATCATAGC AGTGAACCTG
TCGGGCCGCG GCGACAAGGA CGTGGCACAG GTGGAACGTA TGGTCAGAGA GGGGCTTGTG
ACGCCATAA
 
Protein sequence
MPDSLKPILD ELAATFERYR NDPGFLEEFN YYLTRYSGRE TPLYLCANLT RRLGGAKIYL 
KREDLNHLGA HKVNNTIGQI LLAKRMGKKK IIAETGAGQH GVATAATAAL MGMECTIYMG
AEDVERQKLN VFRMQMMGAR VVPATSGQQT LKEAVDEALA AWIREADTTF YLLGSAVGPH
PFPLMVREFQ SVIGRELRAQ MLEAEGRLPD YCIACVGGGS NAIGMFSGFI NDDGVRLVGV
EPAGRGLEYG DHAATLCLGE PGVMHGFNSY MLKDQAGEPA AVYSISAGLD YPGVGPEHSH
LKDLGRAEYV NASDAEALSA FFDLSRTEGI IPALESAHAL AYAMRLAPTL SSDKIIAVNL
SGRGDKDVAQ VERMVREGLV TP