Gene Dde_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0066 
Symbol 
ID3755224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp56972 
End bp58705 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content62% 
IMG OID637780919 
ProductDNA polymerase III, tau subunit 
Protein accessionYP_386562 
Protein GI78355113 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCACG CATCGCTAAC CGCAAAATAC AGGCCGCAGA CCTTTGCCGA CGTTGCCGGA 
CAGGAAACCG TCAAAGCCAT TCTGTCACGG GCCGCGGCCG AAAACAGGGT CGCGCCTGCC
TACTTGTTCA GCGGTACGCG CGGGGTGGGA AAAACCACCA TCGCGCGTAT TTTTGCCAAG
GCGCTTAACT GCACCCGCGG TCCGGCCGCG GAACCCTGCA ACGAGTGTGA ACAGTGCCGC
AAGATAACGC AGGGCATGGC TGTGGACGTG GTGGAGATTG ACGGCGCCTC CAACCGCGGC
ATTGATGACG CCAAACGCCT CAAGGAAGCC ATCGGTTATG CCCCCATGGA GGGCCGGTAC
AAGGTTTTCA TCATCGACGA GGCGCACATG CTCACCCGCG AGGCGTTTAA CGCGCTGCTG
AAAACGCTGG AAGAGCCGCC GGCCAATGTC ACCTTTGTCA TGGCCACCAC CGAGCCGCAT
AAATTTCCCG TAACCATTGT CAGCCGCTGT CAGCATTTTA TTTTCAAACG GCTTACCGAA
AACGGACTGG CAGCGCATCT GGTGCGCATT CTTGAGCGCG AAGGCACAGG ATACGAGTCT
GAAGCGGTCA AGCTTATTGC CCGTCGTGCC GCCGGCAGCG TACGCGACTC CATGTCTTTG
CTGGGACAGG TGCTGGCACT GGGCAGCGAT TCTCTGACCG TGGCGGATGC CCGGGGTATT
CTGGGGCTTG CCGGACAGGA GCTGTTTTTC CGCGTGGCCG ACGCCATCAG GCGTCAGGAC
TGTGTCGGTG TTTCCACCGT GTTGCGCGAT GTTCTTGATC AGGGACTTGA TCTGGGCTTT
TTTTTGCGCG AGCTGACAGG CATGTGGCGC AACCTGTTCA TGTTGCGTCA GGCCGGTGAA
AGCGCATTGC CCCTGCTGGA CCTGCCCGAA GAAGAAGCCC GTCAGTGGCT TGAATGGGCA
CCGCAGTTTG CCCTGTCGCA CATCCATGCC TGCTGGCAGA TGACTCTGGA AGGACAGCGG
CGCGTGCTGA ACAGCCTTGA ACCGGCCATG GCGCTGGAAC TGCTGCTGCT CAATCTTGCA
TTCATGCCGC GCCTGCTGGG TATGCAGCAG GTTTCGCAGA CGGCGCCTGC TCCGGTGCCC
GTGGCCGGTG ACGGACCTGC TCCTTCCGGC GGTTCGTCCG GTACTCCGCC GGCGGGCGGA
CATGCTGCTC CGCCCCGCTC TGCCCCGTCT GTCCCGTCTG TCCCGGACCC TGCCGGTACT
TCCGGTCGTG TTGCGGATGC GGCGAAACCG CAACAGCAAG CGCAGGCAGA CAGTACAGCG
CCCCCCCCCG CCGAGGATGC TCCGCCGGGG CAGTCCGAGC CGTCCGGCCC CGCCACGTGG
GAGGGTTTCG CGCAGTTCTG CCTGCAGCAG AACGGTCAGG ACGGCAAAAG CCTGCGGCTC
CTGCGGCAGA TAAAAGGTGA ACTGCGTGAC GGGGTGCTGC ATATCACCCC CGCGTACCAG
ATGCAGCGCG ACCGTCTGAC ACAGCCGGAA ATGGCAGCCG CTCTGGAGAC TCTGGCCCGC
AGCTACTGGG GTGCGGGTGT TACAGTGGCG GTGGGTGAAC CCACCGAACA GCGCAAGGCC
ATCTCGGACC TGCGCAAGGA ACTGGATGAC CACCCTGCCG TACAGCTTCT GAAAGAAGAG
TTGGGAGCGC GTGTGCTGGC GGTGCGGTAT ATGGAAAAAA ATAACAACGA CTGA
 
Protein sequence
MSHASLTAKY RPQTFADVAG QETVKAILSR AAAENRVAPA YLFSGTRGVG KTTIARIFAK 
ALNCTRGPAA EPCNECEQCR KITQGMAVDV VEIDGASNRG IDDAKRLKEA IGYAPMEGRY
KVFIIDEAHM LTREAFNALL KTLEEPPANV TFVMATTEPH KFPVTIVSRC QHFIFKRLTE
NGLAAHLVRI LEREGTGYES EAVKLIARRA AGSVRDSMSL LGQVLALGSD SLTVADARGI
LGLAGQELFF RVADAIRRQD CVGVSTVLRD VLDQGLDLGF FLRELTGMWR NLFMLRQAGE
SALPLLDLPE EEARQWLEWA PQFALSHIHA CWQMTLEGQR RVLNSLEPAM ALELLLLNLA
FMPRLLGMQQ VSQTAPAPVP VAGDGPAPSG GSSGTPPAGG HAAPPRSAPS VPSVPDPAGT
SGRVADAAKP QQQAQADSTA PPPAEDAPPG QSEPSGPATW EGFAQFCLQQ NGQDGKSLRL
LRQIKGELRD GVLHITPAYQ MQRDRLTQPE MAAALETLAR SYWGAGVTVA VGEPTEQRKA
ISDLRKELDD HPAVQLLKEE LGARVLAVRY MEKNNND