Gene Dde_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0065 
Symbol 
ID3755223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand+ 
Start bp55979 
End bp56902 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content57% 
IMG OID637780918 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_386561 
Protein GI78355112 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCAGA AATCGGAAAC GATCTGGTTT GACGGCAAGC AGGTTGCATG GGACGATGCC 
AATGTGCACG TTTTGACCCA CACCCTGCAT TACGGTCTGG GCGTGTTCGA GGGAATCCGC 
GCCTATAAGT GTGTTGACGG CACTTCCGCC GTGTTCCGCC TGCGCGAACA TGTCGAACGC 
CTGTTTGCTT CGGCCCGCAT TCTGCGCATG GAAATTCCCT ATACCGTCGA CCAGCTTGTG 
GATGCCGTGG TGGAAACGCT GCAGCGCAAC AAACTGGACG AAGGCTATAT CCGCCCCTTG 
AGCTTTGTGG GCGCGGGTGC CATGGGTGTG AACCCCGGCA GCAACCCCAT ACAGACCATC 
ATTGCCACGT GGCCCTGGGG CGCGTATCTG GGTGAAGAGG CGCTGGAAGC GGGCATCCGC 
GTAAAAACCA GTTCCTTCCA GCGTCATCAT GTAAACGCCA TGATGACCAA GGCAAAGGCC 
GTGGGCAACT ATGTAAACTC CATTCTGGCC AAAACAGAAG CTCTTGCAGA CGGTTACGAC 
GAAGGGCTGA TGCTGGATAC CGCGGGATTT GTTTCTGAAG CCACCGGCGA AAACATTTTC 
ATCGTGCGCG GCGGCGTCAT TAAAACAACG CCCCTTACGT CCATACTGGA CGGTATCACC 
CGCAACAGCC TGATGACGCT GGCCGGTGAT CTGGGCTACA CCGTGGTGGA ACAGCAGTTC 
ACCCGCGATG AGCTGTATGT GGCCGATGAA GCCTTTTTCT GCGGCACTGC GGCGGAGGTC 
ACTCCCATAC GTGAAGTGGA CCGCCGCGTT ATCGGCGCCG GCAAGGCCGG ACCGGTCACC 
AAGCATCTGC AGACCGAGTA CTTCAAGCTT GTAAAGGGTG AAAATCCCAA GTACGCACAC 
TGGCTGCATC AGTATTCACT GTAG
 
Protein sequence
MVQKSETIWF DGKQVAWDDA NVHVLTHTLH YGLGVFEGIR AYKCVDGTSA VFRLREHVER 
LFASARILRM EIPYTVDQLV DAVVETLQRN KLDEGYIRPL SFVGAGAMGV NPGSNPIQTI 
IATWPWGAYL GEEALEAGIR VKTSSFQRHH VNAMMTKAKA VGNYVNSILA KTEALADGYD 
EGLMLDTAGF VSEATGENIF IVRGGVIKTT PLTSILDGIT RNSLMTLAGD LGYTVVEQQF 
TRDELYVADE AFFCGTAAEV TPIREVDRRV IGAGKAGPVT KHLQTEYFKL VKGENPKYAH 
WLHQYSL