Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0058 |
Symbol | |
ID | 3755138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 47667 |
End bp | 49913 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780911 |
Product | U32 family peptidase |
Protein accession | YP_386554 |
Protein GI | 78355105 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGAG GAACCCGCCG GTGTTCCGAT TTGCAGCGCT GCCGGATTTT TTTTGCGGGC GGCACCCCGT GGCGGAATCA TTGCTGTTGC ATCTGGGCCC GACTATGGTT AGATGCAGGG TTGCAGGCGG AACTGTGCCG GGGTGCTGGT CTGTCTGCCG CGTGCCGTGT ATCTGACGGA ACTCCTTTCA GACATGGCCG TCCGGCTGCC TTGCCGCGCA GAGTGCGCTG GTGCGGCCGT ATTCCTTCCG CCCCGCAACG GAATCTGATC ATGAAAAAAT TACCCGAAAT ACTTGCCCCT GCAGGCGATA CGCAGTCTTT TCTTGCGGCA CTGGCCGCCG GCGCCGACGC CGTGTACGTG GGCATGAAAC ATTTTTCCGC CCGTATGCAG GCCGACAACT TTTCCGTCAA GGAACTGGCC CGCATGGTTG AACTGGCAAG GCGCGAAGAC CGCAAAGTTT ACATAGCGCT CAACTCCATG CTTAAACCGA CCGACCCTGC CGCGGCGGGA CGGCTCATAC GGCGGCTTGC GCGCGGTGTG CAGCCCCATG CGCTTATCAT GCAGGACCTC GGCGCCGTGG AGATGGCCAG ACAGGCGGGA TTTGAAGGTG AAATTCACCT TTCGACACTG GCCAACATAA CGCACCCTGC AGCGTTGCAC GCTGCCCGCC GCATGGGGGC GGACCGTGTC ATTCTGCCGC GCGAGCTGGA TATAGACGAG GTGCGCCAGT GTAACGACGC CTGTCCCGAA GGGCTTGATC TGGAGCTTTT TGTGCACGGG GCCCTGTGCT ACTGCGTTTC GGGCCGCTGC TACTGGTCCA GTTACATGGG GGGCAAGTCG GGGCTTCGGG GACGCTGTGT GCAGCCCTGC CGCCGTGTGT ACAAGCAGAA GAGCCGCGAG GGGCGGTATT TCTCGTGCCT CGACCTTTCG CTGGACGTGC TGGCCCGCAA CCTGCTGGAC ATGGAAAATC TGTCGTCGTG GAAGATAGAA GGGCGCAAGA AAGGCCCCCA CTATGTTTTT TACACTGTCA CGGCATACCG CATGCTGCGC GACAATCCGG GCGATCCTTC GGTACGCAAG CAGGCAGAAG ACCTGCTGAA GCAGGCGCTC AGCCGTCCCA CTACCCATGC CCGTTTTCTG CCGCAGCGCC AGCATCCGGT GACGGCCCCC AACGATTCGA CCAGTTCCGG CATGCTTGTG GGCAAACTGG CGCGCGATAA AAAGGGTGCG CTGGAGTTCA AGCCCCGTAT GGAGCTGCAG CCGCAGGACT TTTTGCGTGT CGGGTTCGAG GATGATCCGT GGCACCGCAC TGTGCGCGTG ACCCGCAGAG TGCCCAAGGG CGGGGCATTT ACTCTGCCCC ATGCCAAGGG GCGGCCGCCC GCGGCGGGAA CTCCCGTATT TCTGATCGAC CGGCGCGAGA AAGACCTTGT GGACCTGCTG CGCCGCTGGG AAGGCCGTCT GGCCGACGTG CGCGGCGGCA GCGAGACCTC CGTGGATTTC GAACCGGTGC TGCCGGTACG TCTGGACAAG CCGGGCAAAG GGTTTACCGT GCTGCTGCAC GGCAGTATTC CCAAAGGCAG GCGCGGCGGA CGCGAAGGCG GCGTGGTGGA CGGACTGTGG CTGTCTCCCC GCACAGCCGA AGTGTCGCGG ACGCTGGTCT CACGGTATTC GTGGTGGCTG CCGCCCGTGA TCTGGCCCAA CGAGGAAGAC CAGTGGAAAC GCCTTATCAC GCAGGTGCTG CGCAACGGCG CCCGTCATTT TGTACTGGGA GCCCCGTGGC AGATGGAGCT TTTTCCGGAA AATGCCAAAA TAGCGCCTGT GGCCGGTCCT TTCTGCAACG TGGCCAACCC CGCCGCTCTG GCCGTGCTGG AGCGCATGGG GTTCCGCGGG GCCATAGTAA GCCCCGAGCT GTCGGGCGAA GAAGTGCTTT CTCTGCCGTC CATGAGCCCC CTGCCCCTCG GGGTGGTGCT TTCGGGCTAC TGGCCCATGG GGGTCACGCG TAATCCGCTG CAGCCGCTCA AACAGGGCGA ACCCTTCCTC AGTCCCAAGC GTGAACCTTT CTGGGCGCGC CGCTACGGGC AGAATACGTG GATTTTCCCG GGGTGGCCGC TGGATATCAC CGCTCATCAG GATGAACTGA AGGCAGCGGG GTATACGATC TTTGTTCATA TGAAAGAGCA GCCGCCGCGC GAAGTGCCTG AGCCGTCGCG CAGCAGTTCC TTCAACTGGG ATCTGACGCT GCTTTGA
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Protein sequence | MTRGTRRCSD LQRCRIFFAG GTPWRNHCCC IWARLWLDAG LQAELCRGAG LSAACRVSDG TPFRHGRPAA LPRRVRWCGR IPSAPQRNLI MKKLPEILAP AGDTQSFLAA LAAGADAVYV GMKHFSARMQ ADNFSVKELA RMVELARRED RKVYIALNSM LKPTDPAAAG RLIRRLARGV QPHALIMQDL GAVEMARQAG FEGEIHLSTL ANITHPAALH AARRMGADRV ILPRELDIDE VRQCNDACPE GLDLELFVHG ALCYCVSGRC YWSSYMGGKS GLRGRCVQPC RRVYKQKSRE GRYFSCLDLS LDVLARNLLD MENLSSWKIE GRKKGPHYVF YTVTAYRMLR DNPGDPSVRK QAEDLLKQAL SRPTTHARFL PQRQHPVTAP NDSTSSGMLV GKLARDKKGA LEFKPRMELQ PQDFLRVGFE DDPWHRTVRV TRRVPKGGAF TLPHAKGRPP AAGTPVFLID RREKDLVDLL RRWEGRLADV RGGSETSVDF EPVLPVRLDK PGKGFTVLLH GSIPKGRRGG REGGVVDGLW LSPRTAEVSR TLVSRYSWWL PPVIWPNEED QWKRLITQVL RNGARHFVLG APWQMELFPE NAKIAPVAGP FCNVANPAAL AVLERMGFRG AIVSPELSGE EVLSLPSMSP LPLGVVLSGY WPMGVTRNPL QPLKQGEPFL SPKREPFWAR RYGQNTWIFP GWPLDITAHQ DELKAAGYTI FVHMKEQPPR EVPEPSRSSS FNWDLTLL
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