Gene Dde_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0058 
Symbol 
ID3755138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand
Start bp47667 
End bp49913 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content62% 
IMG OID637780911 
ProductU32 family peptidase 
Protein accessionYP_386554 
Protein GI78355105 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGAG GAACCCGCCG GTGTTCCGAT TTGCAGCGCT GCCGGATTTT TTTTGCGGGC 
GGCACCCCGT GGCGGAATCA TTGCTGTTGC ATCTGGGCCC GACTATGGTT AGATGCAGGG
TTGCAGGCGG AACTGTGCCG GGGTGCTGGT CTGTCTGCCG CGTGCCGTGT ATCTGACGGA
ACTCCTTTCA GACATGGCCG TCCGGCTGCC TTGCCGCGCA GAGTGCGCTG GTGCGGCCGT
ATTCCTTCCG CCCCGCAACG GAATCTGATC ATGAAAAAAT TACCCGAAAT ACTTGCCCCT
GCAGGCGATA CGCAGTCTTT TCTTGCGGCA CTGGCCGCCG GCGCCGACGC CGTGTACGTG
GGCATGAAAC ATTTTTCCGC CCGTATGCAG GCCGACAACT TTTCCGTCAA GGAACTGGCC
CGCATGGTTG AACTGGCAAG GCGCGAAGAC CGCAAAGTTT ACATAGCGCT CAACTCCATG
CTTAAACCGA CCGACCCTGC CGCGGCGGGA CGGCTCATAC GGCGGCTTGC GCGCGGTGTG
CAGCCCCATG CGCTTATCAT GCAGGACCTC GGCGCCGTGG AGATGGCCAG ACAGGCGGGA
TTTGAAGGTG AAATTCACCT TTCGACACTG GCCAACATAA CGCACCCTGC AGCGTTGCAC
GCTGCCCGCC GCATGGGGGC GGACCGTGTC ATTCTGCCGC GCGAGCTGGA TATAGACGAG
GTGCGCCAGT GTAACGACGC CTGTCCCGAA GGGCTTGATC TGGAGCTTTT TGTGCACGGG
GCCCTGTGCT ACTGCGTTTC GGGCCGCTGC TACTGGTCCA GTTACATGGG GGGCAAGTCG
GGGCTTCGGG GACGCTGTGT GCAGCCCTGC CGCCGTGTGT ACAAGCAGAA GAGCCGCGAG
GGGCGGTATT TCTCGTGCCT CGACCTTTCG CTGGACGTGC TGGCCCGCAA CCTGCTGGAC
ATGGAAAATC TGTCGTCGTG GAAGATAGAA GGGCGCAAGA AAGGCCCCCA CTATGTTTTT
TACACTGTCA CGGCATACCG CATGCTGCGC GACAATCCGG GCGATCCTTC GGTACGCAAG
CAGGCAGAAG ACCTGCTGAA GCAGGCGCTC AGCCGTCCCA CTACCCATGC CCGTTTTCTG
CCGCAGCGCC AGCATCCGGT GACGGCCCCC AACGATTCGA CCAGTTCCGG CATGCTTGTG
GGCAAACTGG CGCGCGATAA AAAGGGTGCG CTGGAGTTCA AGCCCCGTAT GGAGCTGCAG
CCGCAGGACT TTTTGCGTGT CGGGTTCGAG GATGATCCGT GGCACCGCAC TGTGCGCGTG
ACCCGCAGAG TGCCCAAGGG CGGGGCATTT ACTCTGCCCC ATGCCAAGGG GCGGCCGCCC
GCGGCGGGAA CTCCCGTATT TCTGATCGAC CGGCGCGAGA AAGACCTTGT GGACCTGCTG
CGCCGCTGGG AAGGCCGTCT GGCCGACGTG CGCGGCGGCA GCGAGACCTC CGTGGATTTC
GAACCGGTGC TGCCGGTACG TCTGGACAAG CCGGGCAAAG GGTTTACCGT GCTGCTGCAC
GGCAGTATTC CCAAAGGCAG GCGCGGCGGA CGCGAAGGCG GCGTGGTGGA CGGACTGTGG
CTGTCTCCCC GCACAGCCGA AGTGTCGCGG ACGCTGGTCT CACGGTATTC GTGGTGGCTG
CCGCCCGTGA TCTGGCCCAA CGAGGAAGAC CAGTGGAAAC GCCTTATCAC GCAGGTGCTG
CGCAACGGCG CCCGTCATTT TGTACTGGGA GCCCCGTGGC AGATGGAGCT TTTTCCGGAA
AATGCCAAAA TAGCGCCTGT GGCCGGTCCT TTCTGCAACG TGGCCAACCC CGCCGCTCTG
GCCGTGCTGG AGCGCATGGG GTTCCGCGGG GCCATAGTAA GCCCCGAGCT GTCGGGCGAA
GAAGTGCTTT CTCTGCCGTC CATGAGCCCC CTGCCCCTCG GGGTGGTGCT TTCGGGCTAC
TGGCCCATGG GGGTCACGCG TAATCCGCTG CAGCCGCTCA AACAGGGCGA ACCCTTCCTC
AGTCCCAAGC GTGAACCTTT CTGGGCGCGC CGCTACGGGC AGAATACGTG GATTTTCCCG
GGGTGGCCGC TGGATATCAC CGCTCATCAG GATGAACTGA AGGCAGCGGG GTATACGATC
TTTGTTCATA TGAAAGAGCA GCCGCCGCGC GAAGTGCCTG AGCCGTCGCG CAGCAGTTCC
TTCAACTGGG ATCTGACGCT GCTTTGA
 
Protein sequence
MTRGTRRCSD LQRCRIFFAG GTPWRNHCCC IWARLWLDAG LQAELCRGAG LSAACRVSDG 
TPFRHGRPAA LPRRVRWCGR IPSAPQRNLI MKKLPEILAP AGDTQSFLAA LAAGADAVYV
GMKHFSARMQ ADNFSVKELA RMVELARRED RKVYIALNSM LKPTDPAAAG RLIRRLARGV
QPHALIMQDL GAVEMARQAG FEGEIHLSTL ANITHPAALH AARRMGADRV ILPRELDIDE
VRQCNDACPE GLDLELFVHG ALCYCVSGRC YWSSYMGGKS GLRGRCVQPC RRVYKQKSRE
GRYFSCLDLS LDVLARNLLD MENLSSWKIE GRKKGPHYVF YTVTAYRMLR DNPGDPSVRK
QAEDLLKQAL SRPTTHARFL PQRQHPVTAP NDSTSSGMLV GKLARDKKGA LEFKPRMELQ
PQDFLRVGFE DDPWHRTVRV TRRVPKGGAF TLPHAKGRPP AAGTPVFLID RREKDLVDLL
RRWEGRLADV RGGSETSVDF EPVLPVRLDK PGKGFTVLLH GSIPKGRRGG REGGVVDGLW
LSPRTAEVSR TLVSRYSWWL PPVIWPNEED QWKRLITQVL RNGARHFVLG APWQMELFPE
NAKIAPVAGP FCNVANPAAL AVLERMGFRG AIVSPELSGE EVLSLPSMSP LPLGVVLSGY
WPMGVTRNPL QPLKQGEPFL SPKREPFWAR RYGQNTWIFP GWPLDITAHQ DELKAAGYTI
FVHMKEQPPR EVPEPSRSSS FNWDLTLL