Gene Dde_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDde_0028 
Symbol 
ID3756414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. G20 
KingdomBacteria 
Replicon accessionNC_007519 
Strand- 
Start bp22658 
End bp23692 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID637780881 
ProductD-alpha,beta-D-heptose 7-phosphate 1-kinase 
Protein accessionYP_386524 
Protein GI78355075 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR02198] rfaE bifunctional protein, domain I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATT CTTTTGATAC TGAACGCCTG TGCGCCGCCA TACCGGCTCT GACCGGCAAA 
AGAGTGCTTA TCGTCGGCGA CGTGATGGTG GACGAGTACC TGATCGGCGA TGCAGAGCGT 
ATATCACCCG AAGCTCCCGT GCCTGTGGTG GGTGTTGAGC GCGAGCAACT GCTTATCGGC 
GGAGCCGGCA ACGTGGCCAA AAATATCCAG TCACTGGGCG GAAAGCCGGA ACTGATAAGC 
CTGTGCGGTA CGGGCAGCAA CGCAGCAACG CTGCGCCATG TACTGCAAAA CGAAAACCTG 
CAGGCAAATC TGATTGATAT AGAAGGCAGA AGAACGACCA TTAAAACAAG AGTGCTGGCC 
AGACAGCAGC AGATGGTACG CATAGACCGC GAAGACACCT CTCCGCTGAC CGGCACCGGA 
CTGGACAGAG TGCTTGAAGC CATAAAAGAC AGGCTGCCGC ACCATGATGT AATCATTCTT 
TCCGACTACG GAAAAGGACT GGTTACAGAC GTCTTCATGT CTCGGCTGAA TACGCTTCTG 
GATACATATG CCGCCCGGCA CGGCGTACGC CACAATGTTT TTGTCGACCC CAAAACACGG 
AACTTCCGGC TGTATAAAGA TGTCTTCATC CTGACACCGA ACGCCAAGGA AACAAGCGAA 
GGCGCAGGTA TGCCAGCCGG TTCGCGTGAA GAAATTCTTG CCGCAGGCAA ACGTATCTTC 
GAACTGCTCA ACTGCAGCAA ACTGCTGACC ACACTGGGGG CCTCCGGCAT GGCGCTCTTT 
AACGGTCAGG ATGAAGTGTG GCACATACCC ACCACTGGGC AGGCCGTATT TGACGTAACA 
GGCGCAGGCG ACACTGTCAT AGCAACGCTG GCTCTGGCAC AGGCTGCCGG CATATCTCTG 
CTGGACAGCT GCATGCTGGC AAACTTTGCC GCAGGTGTTG TTGTGGGACA GGTCGGGGCT 
GCATCCGTAT CGCCTCCTGA ACTTGAAGAA GCCGTCCGCA GGCATCAGGC ACCCGCTATC 
AGCCGCTGGC TGTAA
 
Protein sequence
MTYSFDTERL CAAIPALTGK RVLIVGDVMV DEYLIGDAER ISPEAPVPVV GVEREQLLIG 
GAGNVAKNIQ SLGGKPELIS LCGTGSNAAT LRHVLQNENL QANLIDIEGR RTTIKTRVLA 
RQQQMVRIDR EDTSPLTGTG LDRVLEAIKD RLPHHDVIIL SDYGKGLVTD VFMSRLNTLL 
DTYAARHGVR HNVFVDPKTR NFRLYKDVFI LTPNAKETSE GAGMPAGSRE EILAAGKRIF 
ELLNCSKLLT TLGASGMALF NGQDEVWHIP TTGQAVFDVT GAGDTVIATL ALAQAAGISL 
LDSCMLANFA AGVVVGQVGA ASVSPPELEE AVRRHQAPAI SRWL