Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0017 |
Symbol | |
ID | 3755959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 16213 |
End bp | 17547 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637780870 |
Product | sun protein |
Protein accession | YP_386513 |
Protein GI | 78355064 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC AGTCCCCTCG CCGTGGCGGT GTTGCAACAC TTCCTCCGGC ACGAGGTGCC GCTTTGGAAA TATTGCGCGA TGTGCTTGAT AAAAAGCGTG AAGCACAGAG TGTGCTGGAC AGTTACCTTA AAGACAACAG ATTAAGCCCT CAGGATGCCG CTCTGTGCAC GGAGCTTGTG TATGGATACC TGAGGTCGGA AATCAGAATT TCGTGGCTTA TACGCCGTTT TTTAAAGCCG GATTCACGGC TGCCCGCGGA GCTTTTGCTG ACAATGGGTA TTTCTGTGTA TGAAATACTG TATTTACAGC GTGTTCCTGT ATATGCGTCG GTGGACTGGG CTGTTTCGTA TGTGCGTTCG CGGTTCGGAA CGGGACTTTC GCGTCTGGCC AACGCTGTTT TGCGCAGCAT CGACCGGCTG GGCGATGCTC CGCTGCAATC CGGCTGGTAT CGTGAAACGC TGCAGGCCGA AGGCGTTGAT ACCGCAGGAT ATCTGTCGGT ATGGTATGCC GCTCCGCGGT GGGTTGTTGA TATGTGGATT GAAGCATATG GCGAGGAACG TGCTGAGCAG TATCTTGCCG GTTCATCACG TCACGCTCCT GCCGGGGTGC GCATCAACCT GCGGCATCCC GAAGGGCCAC AGACGCATGC CCGCCTGACC GCTCATCCTT CATGTATCGG GCACAGTGCC GCAGGATTGC TTTTTGCTTC CGACTCCCGC CCTGCCGAAC TGTATGTTCT GCAGGAGGAG GGAATAGCTT CGTCGCAGTC TTTTGCCGTG CAGGAAGTTA TGGACGCACT GCGTCCCGAA ACATGGGAAG GCCCTGTGTG GGACTGCTGC TGCGGACGCG GCGGTAAAAC ATGTTCGCTG CTCGAACGGG GCGTGGATGT ATGTGCAGCC AGTGATCCCA GTGAAAAACG TCTTAAAGGG CTGCGTACGG AGCTGGAGCG GCTGGGGCTG CCTGATGTTC CGTTGTTTGC GGCTCCCGCC TCGCAGGTTC CGGAGGGTAT AGCTCCTCGT GCCGTGCTGG CTGATGTGCC CTGCTCCGGA CTTGGTACGC TTTCACGCCG TCCCGACATA CGGCAGCACC GCACTCCCTA TTCCATGGCG CGGCTGGTTA CGCTGCAGTC GGAAATTCTG GACAATGTCT GGCAGGTTCT GCCCGCCGGC GGCCTGCTTG CTTACATTAC CTGTACTCTG AATCCCGAGG AAAACGAACT GCAGATAGCC CGGTTTATGG AGCGCAGCCA GGCACAGCTG ATGCTGGAGT GGACGACTCC GCCCGACAGC CCTGCGTGTG AATATTTTTA CGCGGCGCTG CTGCGCAAAG CGTGA
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Protein sequence | MKKQSPRRGG VATLPPARGA ALEILRDVLD KKREAQSVLD SYLKDNRLSP QDAALCTELV YGYLRSEIRI SWLIRRFLKP DSRLPAELLL TMGISVYEIL YLQRVPVYAS VDWAVSYVRS RFGTGLSRLA NAVLRSIDRL GDAPLQSGWY RETLQAEGVD TAGYLSVWYA APRWVVDMWI EAYGEERAEQ YLAGSSRHAP AGVRINLRHP EGPQTHARLT AHPSCIGHSA AGLLFASDSR PAELYVLQEE GIASSQSFAV QEVMDALRPE TWEGPVWDCC CGRGGKTCSL LERGVDVCAA SDPSEKRLKG LRTELERLGL PDVPLFAAPA SQVPEGIAPR AVLADVPCSG LGTLSRRPDI RQHRTPYSMA RLVTLQSEIL DNVWQVLPAG GLLAYITCTL NPEENELQIA RFMERSQAQL MLEWTTPPDS PACEYFYAAL LRKA
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