Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_0013 |
Symbol | |
ID | 3755955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 13700 |
End bp | 14209 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637780866 |
Product | peptide deformylase |
Protein accession | YP_386509 |
Protein GI | 78355060 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCGAG AAATTCTGAC ATACCCCGAC AGACGCCTTG CCATCGAATG CGAGGAAATT GAAGAGATAA CAGACGAGAT ACGTCAGCTG GCAGCCGATA TGGCTGAAAC GATGTATGAC GCAGACGGTA TCGGTCTGGC TGCGCCGCAG GTGGGTGCCA CCTGCCGGCT TATTGTGGTC GATGTTTCCG GTCCGGAGGC GCGCGAGGAC CTGCGGACAT ACATTAATCC GCGTCTTGAG CTGCTGGAGG GCAAGGTTGA TACCGAAGAG GGCTGCCTGT CCGTGCCTGC ACTGCGCAGC AAGGTAACCC GTACTGAAAA GGTACGTCTG CACGCCACCG ACCTTGACGG CAACGCCGTG TGCATTGACG CCGACGGACT GCTTTCCATC TGTCTGCAGC ACGAAATAGA CCATCTGGAC GGTACGCTGT TTATCGACAA GATAAGCCGC CTTAAGCGTT CACTCTATGA CAACAAAGTG AAAAAATGGC AGAAGCGCGC GAAAAACTGA
|
Protein sequence | MIREILTYPD RRLAIECEEI EEITDEIRQL AADMAETMYD ADGIGLAAPQ VGATCRLIVV DVSGPEARED LRTYINPRLE LLEGKVDTEE GCLSVPALRS KVTRTEKVRL HATDLDGNAV CIDADGLLSI CLQHEIDHLD GTLFIDKISR LKRSLYDNKV KKWQKRAKN
|
| |