Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3541 |
Symbol | |
ID | 3739800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3974548 |
End bp | 3975129 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780830 |
Product | OmpA/MotB |
Protein accession | YP_386471 |
Protein GI | 78224724 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1.09094e-16 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAT GCACCTTTGG TCTCGTTGCC CTGCTCTGTT TCGGTCTCGT TGCGGCTGGT TGCGCCAAAA AGGAGATGGT GAAGCCTGAA GAGGCGGTAC CGCCGGTAGC GGCCCCCCAA CCCACAACTC CGGCCAAACC CGCTGCTCCG CCGGTGAAGG AGGAGCCCAT TGCGGCCCAG CCCATCCCCG AGGCCCCCGT CAAGACGGAA ACCCTCCAAC CGGCCACGGC CCTTGACACC GTCACGGCGA CTCTGGATCG GATCTTCTTC GATTTCGACT CCTTCGTCCT CAGTCAGGCC GCCCGGGATA TCCTTTCCAA GAACGCGGAG TACCTCCTCA AGAAGCAGCC CAATGCCCGG GTCCTCATTG AAGGGCACTG CGACGAGCGG GGCTCCGACG AGTACAACCT GGCCCTGGGG GAAAAGCGGG CCAAGGCGGC CCGTGATTAC CTGGTGACCC TCGGCGTCGC CGCCAATCGC CTTTCCATCA TCAGTTACGG TGAGGAGAAG CCCCTTGATC CGGGACATAC CGAAGAAGCC TGGGCGAAAA ACCGTCGGGC CGAATTCCTC ATTGTCAAAT AA
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Protein sequence | MRKCTFGLVA LLCFGLVAAG CAKKEMVKPE EAVPPVAAPQ PTTPAKPAAP PVKEEPIAAQ PIPEAPVKTE TLQPATALDT VTATLDRIFF DFDSFVLSQA ARDILSKNAE YLLKKQPNAR VLIEGHCDER GSDEYNLALG EKRAKAARDY LVTLGVAANR LSIISYGEEK PLDPGHTEEA WAKNRRAEFL IVK
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