Gene Gmet_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3541 
Symbol 
ID3739800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3974548 
End bp3975129 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content62% 
IMG OID637780830 
ProductOmpA/MotB 
Protein accessionYP_386471 
Protein GI78224724 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.09094e-16 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAT GCACCTTTGG TCTCGTTGCC CTGCTCTGTT TCGGTCTCGT TGCGGCTGGT 
TGCGCCAAAA AGGAGATGGT GAAGCCTGAA GAGGCGGTAC CGCCGGTAGC GGCCCCCCAA
CCCACAACTC CGGCCAAACC CGCTGCTCCG CCGGTGAAGG AGGAGCCCAT TGCGGCCCAG
CCCATCCCCG AGGCCCCCGT CAAGACGGAA ACCCTCCAAC CGGCCACGGC CCTTGACACC
GTCACGGCGA CTCTGGATCG GATCTTCTTC GATTTCGACT CCTTCGTCCT CAGTCAGGCC
GCCCGGGATA TCCTTTCCAA GAACGCGGAG TACCTCCTCA AGAAGCAGCC CAATGCCCGG
GTCCTCATTG AAGGGCACTG CGACGAGCGG GGCTCCGACG AGTACAACCT GGCCCTGGGG
GAAAAGCGGG CCAAGGCGGC CCGTGATTAC CTGGTGACCC TCGGCGTCGC CGCCAATCGC
CTTTCCATCA TCAGTTACGG TGAGGAGAAG CCCCTTGATC CGGGACATAC CGAAGAAGCC
TGGGCGAAAA ACCGTCGGGC CGAATTCCTC ATTGTCAAAT AA
 
Protein sequence
MRKCTFGLVA LLCFGLVAAG CAKKEMVKPE EAVPPVAAPQ PTTPAKPAAP PVKEEPIAAQ 
PIPEAPVKTE TLQPATALDT VTATLDRIFF DFDSFVLSQA ARDILSKNAE YLLKKQPNAR
VLIEGHCDER GSDEYNLALG EKRAKAARDY LVTLGVAANR LSIISYGEEK PLDPGHTEEA
WAKNRRAEFL IVK