| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3540 |
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| Symbol | |
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| ID | 3739799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3973146 |
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| End bp | 3974435 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637780829 |
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| Product | WD-40-like beta propeller repeat-containing protein |
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| Protein accession | YP_386470 |
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| Protein GI | 78224723 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000050948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACGAC GTCTCTTCAT TCTCATCACC ATCATGCTCT GCCTGATCCC CGCACTCCTC
CATTCCCAGG AAGGGTATCG GGAAGTGACG GCTGCGGGAA CCCACAAACT GACCCTCACC
GTGGACTCCC CACGGCGCCT CGGCGGTTCC GATGCTCCCC AGGTGGCCCG CGAGACGGCC
GAAGCGCTCC AGTTCGACAT GGTCCTTGCC GGCCCCTTCA CCGTCACGGC CCCCTCGGCC
GCCGCGGCCT CGGCCGGCAT CCGGCCGGGA GAGTTCGACT TCGCCCCCTG GCGCGGCGCC
GGGGTCGACC TTCTGGTCAA GAGCGGCTAC ACGGTTACGG GAAACGCCAT GACCATGGAG
TTCCGCCTCT ACAACGTCAC CCAGGGGAAG GAGATCCTGG CCAAGCGGTA CACGGGCCGT
CCCGGCGATG TCCGGAGAAT CGCCCATACC TTCTCGGACG ACATCATGGC CGCCCTGACC
GGGGAGCGTG GCCCCTTCAC GGGAAAAATC GCTTTTGTCT CCACCCGGGC CGGCGCCAAG
GCGATCTTCC TCATGGACTA TGACGGTCAC AACGTCCAGC AGCTCACGAA AAACCGCTCC
ATCAACCTGA ACCCCGATTT TTCCCCCAGC GGGAAGGAAA TCATCTTCAC CTCCTACCGC
CAGGGAAATC CGGACCTCTT CCGCCGCGAG CTCTTCACCG GCGCCGAGGC CCGGATCTCC
TCCTACCGGG GGATCAACGC CACCGGCGCC TGGTCCCCCG ACGGCAAGAC CATCGCCCTG
ACCCTGAGCA AGGACGGCAA CTCGGAGATC TACACCATCT CCCGGGACGG GAAGAACCCG
CACCGGCTCA CCAACACCAG CGCCATCGAG GTCTCCCCCG CCTGGTCCCC CGACGTCCGC
AAGATCGTCT TCGTCTCCGA CCGGCTCGGC AAACCCCAGA TTTTCATCAT GAATGCCGAC
GGCACCGGGG TCCGGCGCCT CACCACCAGC GGCAACTACA ACGTGAGCCC CCGCTGGTCC
CCCAAGGGTG ACCGGATCGT CTACAGCCGC CAGGAGGGAG GGTTCCAGAT CTACGCCATC
AACCCCGACG GAACCAACGA TACCAGGCTC ACCAGCGAGG GAAGCAACGA GCATCCCCGG
TGGTCTCCCG ACGGCCGTTT CATCACCTTC AGCTCCACCC GCGGCGGCGG TGAAGGGATT
TACGTGATGA GGGCCGACGG CAGCGGCCAG ACCCGGGTTT CCGGCGGGAA GGGGAGGGAC
TCCCATCCCA CGTGGTCGCC GCGTTGGTGA
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| Protein sequence | MTRRLFILIT IMLCLIPALL HSQEGYREVT AAGTHKLTLT VDSPRRLGGS DAPQVARETA
EALQFDMVLA GPFTVTAPSA AAASAGIRPG EFDFAPWRGA GVDLLVKSGY TVTGNAMTME
FRLYNVTQGK EILAKRYTGR PGDVRRIAHT FSDDIMAALT GERGPFTGKI AFVSTRAGAK
AIFLMDYDGH NVQQLTKNRS INLNPDFSPS GKEIIFTSYR QGNPDLFRRE LFTGAEARIS
SYRGINATGA WSPDGKTIAL TLSKDGNSEI YTISRDGKNP HRLTNTSAIE VSPAWSPDVR
KIVFVSDRLG KPQIFIMNAD GTGVRRLTTS GNYNVSPRWS PKGDRIVYSR QEGGFQIYAI
NPDGTNDTRL TSEGSNEHPR WSPDGRFITF SSTRGGGEGI YVMRADGSGQ TRVSGGKGRD
SHPTWSPRW
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