| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3538 |
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| Symbol | |
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| ID | 3739797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3971978 |
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| End bp | 3972397 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637780827 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_386468 |
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| Protein GI | 78224721 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000000031299 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAATCG GCAGCAGAAA CAACGGCGAC CGCGGCACCA TGTCGCAGAT CAACGTCACC
CCTATGGTGG ACGTGATGCT CGTGCTCCTG GTCATCTTCA TGGTTACGGC CCCCATGATG
CAGCAGGGGG TCCAGGTGAA CCTCCCCAAG GCGGAAACCA AGGCCATGGC CACCCAGGAA
GAGTCGGTGG TCGTCTCCAT CGACCGAAGC GGCAAGGTCT TCATCAACGC CACGGAGGTG
GCTCCGGGGG ACCTGAAGGG AAAGCTGACT TCCATGGTGG CCAACCGGAC CAAGAAGGAG
GTCTTCCTCA AGGCCGACCG GGATGTCCCC TACGGAGATG TGGTGCGAAC CATGGCTGAA
ATCAAGGGGG CCGGCATCGA GCGCCTCGGC ATGGTGACGG AGCCAGCCCC GACAAAATGA
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| Protein sequence | MEIGSRNNGD RGTMSQINVT PMVDVMLVLL VIFMVTAPMM QQGVQVNLPK AETKAMATQE
ESVVVSIDRS GKVFINATEV APGDLKGKLT SMVANRTKKE VFLKADRDVP YGDVVRTMAE
IKGAGIERLG MVTEPAPTK
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