Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3509 |
Symbol | |
ID | 3739050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3939586 |
End bp | 3942690 |
Gene Length | 3105 bp |
Protein Length | 1034 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780795 |
Product | heavy metal efflux pump CzcA |
Protein accession | YP_386439 |
Protein GI | 78224692 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAA AACTCATTGC CTATACGTTG CGGCAGAAAG GAATGATCAT CTTCCTGGCG CTGCTGATTA TCGTCGCGGG ACTGTATTCG TACGCGAGAC TCCCCATCGA CGCCTTTCCC GACGTGACCA ACATCCAGGT GGAGGTTGTC AGCCACGCCG ACGGCCTGTC GGCCATCGAA ATTGAGAGGA ACGTCACCTA CCCCATCGAG ATGGCCATGC GGGGGCTCCC CGACATTGAA CAGATGCGCT CGGTCACCAA ATTCGGCCTC TCCATCGTCA CCATCGTCTT CAAGGACAAC GTGGATATCT ACTTCGCCCG GCAGCTGGTG TTTGAGCGAC TGGCAGAGGC CCGGGAGAAG GTGCCGAAGG GAGTCGAGGT CGCCATGGGG CCCATCGGCA CCGCCATGGG GGAGATCTAC CAGTACACCC TGGAAGGAAA GATGCCCCAG GATCCGCAGC AGAAGACGGC CTACCTGACC AACCTGCGGA CCGTCCAGGA ATGGATCGTG ACCCCGCAGC TGAAGAACGT GGCCGGGGTG AACGAGATCA ACTCCTTCGG CGGCTATTTC AAGCAGTACC AGGTGCTCGT GGCGCCGGAA AAGCTCCTGA AGTACGGCAT CACCGTGGAT GACGTCTACA CCGCCATCGG CAGCAACAAC GAGAACGTGG GGGGCAACCT CCTGGAGCGG GGGACGGACC AGTACATCGT CCGCGGCGTC GGCCTGATCA AGGATGTGGG GGACATCGAG AACATTGTCC TCAGGTCGGC GGGGGGGACC CCCACCTACA TCCGCGACGT GGCCCAGGTG AAGGTGGGTG AGGCGGTCCG CATGGGGGCC GCCATGAAGG ACGGCAAGGA TGAGTGCGTC GGCGGCATCG TCATGATGCT GCGGGGCGAG AACAGCCGCG ACGTGGTGCG CCGGGTTGCG GAAAAAGTGA AGGAAATCAA CGAGAACAAC GTCCTGCCGG AAGGGATCAA GATCGTTCCC TATTACGACC GGAGCGACAT CGTCAAGGCC AGCGTCGGCA CGGTCAACAA GGCGCTCATC GAAGGTTCTA TCCTGGTCCT GATCGTTCTC TATCTGCTCC TGAACAGCAT CCGGGGGAGC ATCGTAGTCC TGATCGCCCT CCCCCTCTCC CTCCTGGCGA CGTTCGTCGT GATGAAGCTC TCGGGAATCA GCGCCAACCT CATGTCGCTG GGGGGCCTGG CCATCTCCAT CGGGATGATC ATCGACACCA CCATCATCCA GGTGGAGAAC GTGCAGCGGC ACCTAAGCGA AGAAGGGGAA CGCCATCCCA AACTGGTGAC GGTGCTGAAG GCGGTCATGG AGGTGCGCAA ACCGAGTATC TTCGGCGAAA TGATCATCGC TATCACCTTC ATCCCGATCC TGGCTCTGGA GGGGATCGAA GGGAAGATGT TCGGCCCCCT GGCCATCACC GTGGCCATTG CCCTCCTGGC GTCCCTGCTC CTTTCCATTT TCATCATCCC AGTGCTCTGC AGCCTCTTCC TGAAGCCGGA TCCGGAAAAG GAGAGCGTCA TCATGCAGCG GGCCCACCGG CTCTACGAGC CGCTCCTCGA CTACGCCATG AACAAGCGGC GCGTGGTGCT CGGGGTGGCC GGAACGCTCC TGGTGGTCTC CCTCGTCATG GTGACCCGGC TCGGGACGGA GTTCATCCCT ACCATGGATG AAGGCTCCTT CGACATGGAT GTCTCCCTGC TCCCCGGTGT TTCCCTGGCC AAGGCCATGG AGGTCAACCA GCGGGTTGCA GAGAAACTGA AGCAGTTCCC CGAGCTGGGA ACGGTGGTGT CGCGGACCGG CCAGACCGGC GTGGCCCTGG ACACCAGGGG GTCGGACAAG ACCGGCTACG TGGGGATCTT CAAGCCGAAG GACGAATGGC CGCGGGACAT CTCCAAGGAA GAGCTCACCA ACGAGATGCG CGAGTCCCTG GAGTCCATCG CCGGCATCAC CTTCGGCTTC AGCCAGCCTA TCCAGTGCCG CATCGACGAG CTGGTGGCCG GAACCCGGGC GCAGCTGATC CTCAAGCTCT TCGGCGACGA CATCGACGTG CTCAGTGCAA AGTCCCAGGA GATCGCCAAG GTCCTCTCCA CCATCAGGGG CGGCACCGAC CTGAACGCCG AAAAGGTCTC CGGACAGCCC TACCTGACCG TCAACATCGA CCGGGCAAAA ATCGCCCGCT ACGGCCTCAA CATCAGCGAC GTGCAGAAGG TGATCGAAAT CGCCGTTGCC GGCAAGGCGG CATCGCAGCT CTACGAGGAG AACCGCAGCT TCGACATCAC GGTGCGTCTG CCGGAGGAGA AGCGCAACTC CCTGGACGCC ATCAACAACC TGATCATCAC CACGAAGACC GGGGTCAACG TCCCCCTCCA GCAGCTGGCC GAGGTGAAGA TGATCGAAGG CCCGGTGCAG ATCAGCCGCC AGGACGGGGT GCGCCGCATC GGGATCGAGA TGAACATCAC CGGCCGGGAC ATCGGCAGCT TCGTTTCCGA GGCGAAGCAG AAGATCAGGG AAGAAGTGAA GCTCCCCCCC GGTTACTACC TCACCTGGGG CGGGCAGTTC GAGAACCAGC AGCGGGCCAT GAAGAAGCTG ATGATCATCG GACCGGTGGC CATCGGCCTG ATCCTGCTCC TCCTCTACGT CACCTTCCGT TCGATCCGCC TGGCGTTCCT GGTCATCGCC AACCTCCCCT TTGCCCTGAT CGGCGGGGTA TTCGCGCTCT TCATCTCCGG GCAGTACCTG TCGGTGCCGG CCTCGGTGGG GTTCGTGGTC CTCTTCGGCG TTGCCGTCCT GAACGGCCTC GTGCTGGTGT CACGGATCTC ACAACTGCGG GAGGAGGGGC TGGAACTGGA GGAGGCCATC CGCAAAGGTG CCGCCGACCG ACTGCGGCCA GTGCTGATGA CCGCCTCCAT CGCCATCTTC AGCCTGATCC CCATGCTCCT GGCCGGCGGC ACCGGCTCGG AGATTCAGAA ACCGCTGGCA ACGGTTGTCG TGGGCGGACT GGTGACGTCC ACCCTGCTGA CGCTTCTGGT CATTCCGTCG GTGTATGGCT GGTTTGAAAA GAGGAAGGTG GAGGAAGAGG TATGA
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Protein sequence | MLEKLIAYTL RQKGMIIFLA LLIIVAGLYS YARLPIDAFP DVTNIQVEVV SHADGLSAIE IERNVTYPIE MAMRGLPDIE QMRSVTKFGL SIVTIVFKDN VDIYFARQLV FERLAEAREK VPKGVEVAMG PIGTAMGEIY QYTLEGKMPQ DPQQKTAYLT NLRTVQEWIV TPQLKNVAGV NEINSFGGYF KQYQVLVAPE KLLKYGITVD DVYTAIGSNN ENVGGNLLER GTDQYIVRGV GLIKDVGDIE NIVLRSAGGT PTYIRDVAQV KVGEAVRMGA AMKDGKDECV GGIVMMLRGE NSRDVVRRVA EKVKEINENN VLPEGIKIVP YYDRSDIVKA SVGTVNKALI EGSILVLIVL YLLLNSIRGS IVVLIALPLS LLATFVVMKL SGISANLMSL GGLAISIGMI IDTTIIQVEN VQRHLSEEGE RHPKLVTVLK AVMEVRKPSI FGEMIIAITF IPILALEGIE GKMFGPLAIT VAIALLASLL LSIFIIPVLC SLFLKPDPEK ESVIMQRAHR LYEPLLDYAM NKRRVVLGVA GTLLVVSLVM VTRLGTEFIP TMDEGSFDMD VSLLPGVSLA KAMEVNQRVA EKLKQFPELG TVVSRTGQTG VALDTRGSDK TGYVGIFKPK DEWPRDISKE ELTNEMRESL ESIAGITFGF SQPIQCRIDE LVAGTRAQLI LKLFGDDIDV LSAKSQEIAK VLSTIRGGTD LNAEKVSGQP YLTVNIDRAK IARYGLNISD VQKVIEIAVA GKAASQLYEE NRSFDITVRL PEEKRNSLDA INNLIITTKT GVNVPLQQLA EVKMIEGPVQ ISRQDGVRRI GIEMNITGRD IGSFVSEAKQ KIREEVKLPP GYYLTWGGQF ENQQRAMKKL MIIGPVAIGL ILLLLYVTFR SIRLAFLVIA NLPFALIGGV FALFISGQYL SVPASVGFVV LFGVAVLNGL VLVSRISQLR EEGLELEEAI RKGAADRLRP VLMTASIAIF SLIPMLLAGG TGSEIQKPLA TVVVGGLVTS TLLTLLVIPS VYGWFEKRKV EEEV
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