Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3419 |
Symbol | |
ID | 3741215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3833961 |
End bp | 3837548 |
Gene Length | 3588 bp |
Protein Length | 1195 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637780709 |
Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
Protein accession | YP_386356 |
Protein GI | 78224609 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000141047 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGCA ACATGGTTAC CATCGACGGC AACACAGCGG CCGCCCACGT GGCCCACGCC ACAAACGAGG TGATTGCCAT CTACCCCATC ACCCCGTCTT CGGTCATGGG AGAGATCTCG GACATGAAGA GCGCCATGGG TGAGAAGAAC ATCTGGGGGA CCATTCCGTC GGTCGTCGAG ATGCAGTCCG AGGGGGGCGC CTCCGGTGCC GTCCACGGCG CGCTCCAGGC AGGGGCGCTG ACCACCACCT TCACCGCCAG CCAGGGCCTG CTCCTGATGA TCCCGAACAT GTTCAAGATC GCCGGCGAGC TGACCTCCAC GGTCTTCCAC GTCTCGGCCC GCGCCATCGC TGCCCAGGCT CTCTCCATCT TCGGCGACCA CTCCGACGTC ATGTCCTGCC GCTCCACCGG CTGGGCCATG CTCTGCTCCA ACAACGCCCA GGAGGTCATG GACTTCGCCC TGATCTCCCA GGCCGCCACG CTCCGCGCCC GGGTGCCGTT CCTCCACTTC TTCGACGGAT TCCGTACCTC CCACGAGGTC TTGAAGGTGG AAGAGCTGAC CTTCGACGAC ATGCGCGCCA TGCTGGACGA CGAGCTGATC GCCGCCCACA AGGCCCGCGG ACTCTCCCCG GATCACCCCT TCATGCGCGG CACCGCCCAG AACCCCGACG TTTACTTCCA GGGGCGCGAG ACGGTAAACT CCTACTACCC GAAGTGCATC GAGATCGTCG AAGAGGAGAT GAACAAGTTC GCCAAGATCA CGGGCCGCCA GTACAAGCTG GTGGACTACG TGGGCGCCCC CGACGCCGAC CGCGTCATCG TGATCATGGG CTCCGGCGCC GACACGGCGC AGGAGACGGT TGAGAACCTC TCCGCCAAGG GTGAGAAAAT CGGCGTGGTG AAAGTCCACC TCTACCGGCC GTTCCCCATC GACGCCTTCA TCGCCGCTCT GCCGAAGACC GTAAAGAAGA TCGCCGTCCT CGACCGGACC AAGGAGCCCG GCGCCCTGGG CGAGCCCCTC TACATGGATG TCCGCACTGC CATCGGCGAG GCCATGGCCG ACGGCAAGTG CCAGTTCGAC GGCTACCCGG TTATCGTCGG CGGCCGCTAC GGCCTCGGAT CCAAGGAGTT CACCCCGGCC CAGGCCAAGG CGGTGTTCGA TAGCCTCGCC ACCGACAAGC CGAAGAGGAA CTTCGTGGTC GGTATCACCG AGGACGTGAC CAACAGCAGC CTCCCCTGCG ATCCGGCCTT CTTCAACCCG ATGGAAGGGG CCTACCAGGC CATGTTCTTC GGCCTCGGCT CCGACGGCAC CGTGGGCGCC AACAAGAACT CCATCAAGAT CATCGGCGAG ATGACCGACA ACAACGCCCA GGCCTACTTC GTCTACGACT CCAAGAAGGC CGGCTCCATG ACCACGTCGC ACCTGCGCTT CGGCAAGAAG TATATCCGGG CGCCGTATCT GGTGCAGGAG GCCGACTTCG TGGCCTGCCA CAACTTCGCC TTCGTGGAGA AGTACGACAT GCTGGCCAAG GCCAAGCAGG GGGCCACGTT TCTCCTGAAC GCCCCCTTCG ACCACAACGA GATCTGGGAC AAGCTCCCCA CCGACGTGCA GCAGCAGATC ATCGACAAGA AGCTGAAGTT CTACGTGATC GACGGTGTGC GGCTCGGCAA CGAGATCGGC CTCGGTCCCC GGATCAACGT CATCATGCAG ACCGCGTTCT TCAAGATCTC CAACATCATC CCGCTGGATC AGGCCGTTGC CGAGATCAAG GGCGCCATCA AGAAGTCCTA CGGCAAGGCG GGTGAAGCGG TCGTTGCCAT GAACTATAAG GCGGTGGATG CCGGCCTCAA CAACTTCTAC GAGGTGGCGG TGCCCGAGAA GGCCACCAGC ACCATCACGA AGCCGCCGGT CGTCAGTCCC AAGGCGCCCC AGTTCGTTCA GGAGACCACC GCGCCCATGA TCGCCGGCCT CGGCGACGAT CTGCCGGTTT CCAAGATGCC GGCCGACGGC ACCTTCCCGA CGGCCACCGC CCAGTTCGAG AAGCGGAACA TCGCCGTGGA TATCCCGGTA TGGGACGAGC AGCTCTGCAT CCAGTGCGGC ATCTGCTCCT TCGTCTGCCC CCACGCCACC ATCCGGATGA AGGCCTACGA CGCCTCTGTC CTTTCCGGCG CTCCGGCCAC CTTCAAGTCG GTGGACTGCA AGGTTCCCGA GTTCAAGGGA CAGAAGCTGA CCGTCCAGGT GGCTCCGGAA GACTGCACCG GCTGCGGCGC CTGCGTCCAC AACTGCCCGG CCAAGAGCAA GGAAGACCCG AACCACAAGG CCATCAACAT GGCATTCCAG GCCCCGCTCA GAGCACAGGA AGTGGCGAAC TGGGATTTCT TCCTCACCAT TCCCGATGTT GATCCGACCG TGGCCAAGCT GGATACCGTC CGCGGCTCCC AGCTGGTTCG CCCGCTGTTC GAGTTCTCCG GCGCTTGCGC CGGCTGCGGC GAGACCCCGT ACCTGAAGCT TCTGACCCAG CTCTTCGGCG ATCGGACCCT CATCGCCAAC GCCACCGGCT GTTCCTCCAT CTACGGTGGC AACCTCCCGA CCACCCCCTA TGCCAAGCGG GCCGACGGGC TTGGTCCGGC TTGGTCAAAC TCCCTGTTCG AGGACAACGC CGAGTTCGGC TACGGCATGC GGCTGGCCGT GGACAAGTTC AACGCCATGG CCCTTGAGCT GATCGACAAG CTTTCCTCCT CCTGCTCCTG CTCTTCCTGC ACGAGCGCGG TACCCCTCAT GAACGAGATC AAGGGTGCCG ACCAGTCGAC CCAGGCCGGC ATCGAGGCCC AGCGCGGTCG GGTGGCGGAG CTGAAGAAAG CCCTGGCCGG CTGCCCCGAG GCGGAGGCCA AGCGTCTCCT CACCGTGGCC GACTACCTGG TCAAGAAGTC GATCTGGTGC ATCGGCGGTG ACGGCTGGGC CTACGACATC GGCTACGGCG GCCTCGACCA CGTCATTGCC AGCGGCAAGA ACATCAACCT GCTGGTTCTC GACACCGAGG TGTACTCCAA CACCGGCGGC CAGGCCTCCA AGTCGACCCC GCTGGGCGCC GTTGCCCAGT TCGCCGCCGG TGGCAAGGCC GTTTCCAAGA AGGACCTCGG CATGATGGCC ATGTCCTACG GCTCGGTTTT CGTGGCGGCC GTCTCCCTGG CCAATCCGGC CCAGTGCATC AAGGCCTTGC TGGAGGCGGA AGCCTATGAC GGCCCGTCCC TCATCATCGC CTACGCGCAC TGCATCGCCC ACGGCATCGA CATGACCAAG GCCGTCGATT GCCAGAAGCG GGCGGTCAAC TCCGGCTACT GGCCGCTGTA CCGCTACAAT CCGCAGCTTG CCGCCGAGTG CAAGAACCCG CTGCAGCTGG ACAGCAAGGC CCCTACCATC GCCTTCGACG AGTACGTCAA CAGCGAGAAC CGCTACCGCG TCCTCAGAAA GAACAACCCG AAGGGGTACG AGGAGCTGAT GCGGAAGGCG GCTGCCTGGT CCAAGGCCCA CTTCGGCTAC TACCAGAAAC TGGCGGCCCT CAACTTCGAG GAGACCTGCG AGAAGTAA
|
Protein sequence | MSRNMVTIDG NTAAAHVAHA TNEVIAIYPI TPSSVMGEIS DMKSAMGEKN IWGTIPSVVE MQSEGGASGA VHGALQAGAL TTTFTASQGL LLMIPNMFKI AGELTSTVFH VSARAIAAQA LSIFGDHSDV MSCRSTGWAM LCSNNAQEVM DFALISQAAT LRARVPFLHF FDGFRTSHEV LKVEELTFDD MRAMLDDELI AAHKARGLSP DHPFMRGTAQ NPDVYFQGRE TVNSYYPKCI EIVEEEMNKF AKITGRQYKL VDYVGAPDAD RVIVIMGSGA DTAQETVENL SAKGEKIGVV KVHLYRPFPI DAFIAALPKT VKKIAVLDRT KEPGALGEPL YMDVRTAIGE AMADGKCQFD GYPVIVGGRY GLGSKEFTPA QAKAVFDSLA TDKPKRNFVV GITEDVTNSS LPCDPAFFNP MEGAYQAMFF GLGSDGTVGA NKNSIKIIGE MTDNNAQAYF VYDSKKAGSM TTSHLRFGKK YIRAPYLVQE ADFVACHNFA FVEKYDMLAK AKQGATFLLN APFDHNEIWD KLPTDVQQQI IDKKLKFYVI DGVRLGNEIG LGPRINVIMQ TAFFKISNII PLDQAVAEIK GAIKKSYGKA GEAVVAMNYK AVDAGLNNFY EVAVPEKATS TITKPPVVSP KAPQFVQETT APMIAGLGDD LPVSKMPADG TFPTATAQFE KRNIAVDIPV WDEQLCIQCG ICSFVCPHAT IRMKAYDASV LSGAPATFKS VDCKVPEFKG QKLTVQVAPE DCTGCGACVH NCPAKSKEDP NHKAINMAFQ APLRAQEVAN WDFFLTIPDV DPTVAKLDTV RGSQLVRPLF EFSGACAGCG ETPYLKLLTQ LFGDRTLIAN ATGCSSIYGG NLPTTPYAKR ADGLGPAWSN SLFEDNAEFG YGMRLAVDKF NAMALELIDK LSSSCSCSSC TSAVPLMNEI KGADQSTQAG IEAQRGRVAE LKKALAGCPE AEAKRLLTVA DYLVKKSIWC IGGDGWAYDI GYGGLDHVIA SGKNINLLVL DTEVYSNTGG QASKSTPLGA VAQFAAGGKA VSKKDLGMMA MSYGSVFVAA VSLANPAQCI KALLEAEAYD GPSLIIAYAH CIAHGIDMTK AVDCQKRAVN SGYWPLYRYN PQLAAECKNP LQLDSKAPTI AFDEYVNSEN RYRVLRKNNP KGYEELMRKA AAWSKAHFGY YQKLAALNFE ETCEK
|
| |