Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3404 |
Symbol | |
ID | 3741182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3819234 |
End bp | 3820253 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637780694 |
Product | pyridoxal phosphate biosynthetic protein PdxA |
Protein accession | YP_386341 |
Protein GI | 78224594 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACA CTAAACCACG TATTGTCATA ACCATGGGGG ACCCCACCGG GGTCGGCCCC GAGATCATCG CCGCAACCCT GGCCGAGCCA GAGGTGCGCC AATGCTGCCG CTTCCTCGTT GTCGGCGACA GCGCGGCCAT GGCACGGGGA ATCACCGTCG CAGGCGCCGC GCTCCGGGTA GAGCGGACCG ATACCCTGAA CTGGGAAGAA AGCAAAGAAG GGGTGCTCCC CCTTTGGGAG ATTTCGTCCC TCACCGAAGC GGACATGCAG TATGGCTGCC CCACCGTTGC CAGCGGCGAC GCCATGTACC GGGCCATCTG CGAGGCCGCG CGACTCTGCC TTGAAGGAAA TGCCGACGCC ATGGCGACCG CTCCCATCAG CAAGGAGGCC CTGAACCGGG CCGGGCATCG GTATCCGGGG CATACGGAAC TCCTGGCCGA ACTGGCGGGG GCGGAGCGGG TCGTCATGAT GCTGGCCGGC TTCCGGCTCC GGGTCACTCT CGTCACCATC CACGAGGCTT TGGCCGACGT GCCGCGTCTA GTGACCTTCG AGCGGGTGCT GGAGACAATC CGGATTACCC ACCGGGATCT GCACCGCTAT TTCAGGAGGA ATCCCCGCAT CGCGGTCCTG GCCCTCAATC CCCACTGCGG CGAAGGGGGG ATGTTCGGGG ACGAGGAGGC GCGCATCATT GCCCCTGCCG TGGCGGCTGC CCGGCAGGAG GGGATCGATG CGATCGGCCC CCTCTCGGCC GATACGCTTT TCCACTTCGC CGTCCAGGGC GCCTACGACG CGGTGGTCTG CATGTACCAC GACCAGGGAC TCATCCCCCT GAAGCTCCTC CACTTCGACG ACGGGGTCAA CGTGACCCTA GGGCTCCCCA TTATCCGCAC CTCCGTGGAC CACGGCACCG CCTACGATCT GGCCGGAACC GGCAGGGCCT CGGCCGAGAG CATGAAGGCG GCCATCCTCA TGGCGGCGGA GATGGCGCGG GTGAAGGGAT CGGGAGGCGG AACACCGTGA
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Protein sequence | MPNTKPRIVI TMGDPTGVGP EIIAATLAEP EVRQCCRFLV VGDSAAMARG ITVAGAALRV ERTDTLNWEE SKEGVLPLWE ISSLTEADMQ YGCPTVASGD AMYRAICEAA RLCLEGNADA MATAPISKEA LNRAGHRYPG HTELLAELAG AERVVMMLAG FRLRVTLVTI HEALADVPRL VTFERVLETI RITHRDLHRY FRRNPRIAVL ALNPHCGEGG MFGDEEARII APAVAAARQE GIDAIGPLSA DTLFHFAVQG AYDAVVCMYH DQGLIPLKLL HFDDGVNVTL GLPIIRTSVD HGTAYDLAGT GRASAESMKA AILMAAEMAR VKGSGGGTP
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