| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3400 |
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| Symbol | |
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| ID | 3741178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3814163 |
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| End bp | 3815233 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637780690 |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_386337 |
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| Protein GI | 78224590 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA TCGACACACT CTTTAAAATG CTCAAGGATC AGGGGGCTTC CGACCTCCAC
CTCTCCTCCG GGGCGCCCCC CATCTTCCGG CTCCACGGCG AGATGGCCCG CCAGAACTTC
AAGCCTCTCA CCCATGACGA GCTGAAGGCC ATCCTCTACG AGATCCTCAC CGAGAAGCAG
AAGGCCGACT TCGAGGAGCG CCACGACCTC GACTTCGCCT ACGCCATCCC GGGGCTCGCC
CGGTTCCGGG GGAACTACAT GCTGACCCAC CGGGGGATCG CCGCGGTCTT CCGGATCATC
CCCAGCAAGA TCCTCTCGGC CGACGATCTC AGCCTCCCCG ACGGGGTCCG GCGCATGACC
CTGTTCAAGA AGGGGCTCGT GCTCGTCACC GGCCCCACCG GCTCGGGGAA ATCCACCACC
CTGGCCGCCA TGATCGACCT CATCAACGCA ACCCGCAAGG AGCACATCCT CACCCTGGAG
GACCCCCTCG AATTCATCCA CGAGAACAAG ATGTCGCTCC TGAACCAGCG GCAGATCGGC
GAACACTCCA TGACCTTCAC CGCTGCCCTG CGGGCAGCCC TGCGGGAAGA CCCCGACGTC
ATCCTCGTGG GGGAGATGCG GGACCTGGAG ACCATCGGCC TCGCCATGAG TGCCGCCGAG
ACCGGCCACC TGGTCTTCGG GACGCTGCAC ACCAACTCGG CGGCCAAGAC CATCGACCGG
ATCATCGACG TCTTCCCCAC CGACCAGCAG GAGCAGACCC GGGCCATGCT CTCCGAATCC
CTCAAGGGGG TCGTCTGCCA GCAGCTCCTG AAGACCGCCG ACGGCAAGGG GCGGGTGGCG
GCCCTGGAGA TCATGCTCGG CACCCCGGCC ATCGGCAACC TGATCCGCGA GGGGAAGACC
TTCCAGATCC CCTCCATCAT CCAGACCGCC AAGCGGGACG GGATGCAGCT CATGGACCAG
CACCTCCTGG ACCTCTTCAA GACCAAGCGG ATCACCGCCG AAGAGGCCTA CCGCTGCGCT
CAGGACAAGA AACAGTTCGA GCAGTATTTG GCCGAGAAGC CGGCCCAGTA A
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| Protein sequence | MARIDTLFKM LKDQGASDLH LSSGAPPIFR LHGEMARQNF KPLTHDELKA ILYEILTEKQ
KADFEERHDL DFAYAIPGLA RFRGNYMLTH RGIAAVFRII PSKILSADDL SLPDGVRRMT
LFKKGLVLVT GPTGSGKSTT LAAMIDLINA TRKEHILTLE DPLEFIHENK MSLLNQRQIG
EHSMTFTAAL RAALREDPDV ILVGEMRDLE TIGLAMSAAE TGHLVFGTLH TNSAAKTIDR
IIDVFPTDQQ EQTRAMLSES LKGVVCQQLL KTADGKGRVA ALEIMLGTPA IGNLIREGKT
FQIPSIIQTA KRDGMQLMDQ HLLDLFKTKR ITAEEAYRCA QDKKQFEQYL AEKPAQ
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