Gene Gmet_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3365 
Symbol 
ID3739109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3781897 
End bp3783459 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content66% 
IMG OID637780654 
Producttype II secretion system protein E 
Protein accessionYP_386302 
Protein GI78224555 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.219755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0138681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CCCACGACGT GGAACGCATA GCCGAAAGGC TCGGTATCCC TTTCACGGCC 
GAAATCGAGG AAGGTGAAGC CGACTTGACG CTCCTGGCCC GGCTTCCCCT CGCTTTCGCC
CGGGGGCGGC TCGTCCTGCC CTTGCGGGAG CGAGACGGGA GACTGATGGT GGCGGCCGGG
AACCCGGCCG ACCTGGCCGC CGTTGACGAG GTGCGCGGGG TCTACGGCCT GCCGGTGGAG
CTTGTGGCGG CGCCGCAAAA GACGGTCCTC GACGCGGTGA ACCGCCTCTA TGGCCGCCTC
GGGAGCACGG CCCAGGAGGT GGTGGAGGAA CTGGTTGGAG AAGACCTCTC TGTCATCGCC
ACCGAGCTCT CGGAACCCAA GGATCTCCTG GATCTGACCG ACGAGGCCCC GGTTATCCGG
CTCCTCAACT CCATCCTCTC CGAGGCGGTG AAGGAGCGGG CCAGCGACAT CCACATCGAG
CCCTACGAGC GGGAGCTGGA GGTCCGGTTC AGGATCGACG GCATCCTCTA CAAAAAGCTC
GCCCCCCCCA AGGTGGTGCA GGAGGCCCTT GCCTCCCGGG TGAAGATCAT GGCAGGCCTC
AACATCGCCG AAAAACGCCT CCCCCAGGAC GGCCGCATCC GGGTCATCGT GGCAGGGCGC
GACGTGGACA TCCGGGTCTC CATCATCCCC ACCTTTTTCG GCGAGCGGAC CGTGCTCCGG
CTCCTGGACA AGCAGAAGGG GATCATCTCC CTGGCCGACA TCGGCATGGA AGAGCGGGGG
GTCGCCGCCA TGGAGCGGCT CCTGTCACGC ACCAGCGGCA TCATCCTCGT CACCGGCCCC
ACGGGGAGCG GCAAGTCCAC CACCCTCTAC GCGGCCCTGA ACCGACTCAA CTCCCCCGAG
AAGAACATCA TCACCATCGA GGACCCCATC GAATACCAGA TCAAGGGGAT CGGCCAGATC
CAGGTGAACC CCAAGATCGA CCTCACCTTT GCCCAGGGGC TCCGGGCCAT CCTCCGCCAG
GACCCGGACA TCGTCATGGT GGGGGAGATC CGGGACGCCG AGACTGCGGA GATCGCCATG
CAGGCCTCCC TCACGGGGCA CCTGGTCCTC TCCACCCTCC ACACCAACGA TTCGGCCACG
GCCATCGCCC GGCTCGTGGA CATGGGGATC GAACCGTTCA TGGTGGCGTC GTCCCTTTCG
GCGGTCCTGG CCCAGCGTCT CGTGCGTCGC ATCTGCCCCC ACTGCCGGGA GCCCTATACG
CCCGAGCGCC AGTACGCCGG CATCACTCTC CCCGCCACCC TCTACCGGGG ACGGGGATGC
GAGAAGTGCT ACGGACTCGG CACCTGGGGA CGGGTCGGCA TCTACGAGCT CCTCCCCGTG
GACGGGGAGA TCTGTTCCAT GATCATCCGG CGGGAACCGG CGGGAACCAT CAAGGAGTAC
GCCGTCTCCC GCGGCATGCG GACCCTGCGG GATGATGGCC TTGCCAAGGC GGCGGCCGGC
ATCACCACCA TCGAGGAGGT TCTGCGGGTG ACCCAGGAGG AGTATGCCGA CCTTCCGGTA
TAG
 
Protein sequence
MTDTHDVERI AERLGIPFTA EIEEGEADLT LLARLPLAFA RGRLVLPLRE RDGRLMVAAG 
NPADLAAVDE VRGVYGLPVE LVAAPQKTVL DAVNRLYGRL GSTAQEVVEE LVGEDLSVIA
TELSEPKDLL DLTDEAPVIR LLNSILSEAV KERASDIHIE PYERELEVRF RIDGILYKKL
APPKVVQEAL ASRVKIMAGL NIAEKRLPQD GRIRVIVAGR DVDIRVSIIP TFFGERTVLR
LLDKQKGIIS LADIGMEERG VAAMERLLSR TSGIILVTGP TGSGKSTTLY AALNRLNSPE
KNIITIEDPI EYQIKGIGQI QVNPKIDLTF AQGLRAILRQ DPDIVMVGEI RDAETAEIAM
QASLTGHLVL STLHTNDSAT AIARLVDMGI EPFMVASSLS AVLAQRLVRR ICPHCREPYT
PERQYAGITL PATLYRGRGC EKCYGLGTWG RVGIYELLPV DGEICSMIIR REPAGTIKEY
AVSRGMRTLR DDGLAKAAAG ITTIEEVLRV TQEEYADLPV