| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3365 |
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| Symbol | |
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| ID | 3739109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3781897 |
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| End bp | 3783459 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780654 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_386302 |
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| Protein GI | 78224555 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.219755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0138681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA CCCACGACGT GGAACGCATA GCCGAAAGGC TCGGTATCCC TTTCACGGCC
GAAATCGAGG AAGGTGAAGC CGACTTGACG CTCCTGGCCC GGCTTCCCCT CGCTTTCGCC
CGGGGGCGGC TCGTCCTGCC CTTGCGGGAG CGAGACGGGA GACTGATGGT GGCGGCCGGG
AACCCGGCCG ACCTGGCCGC CGTTGACGAG GTGCGCGGGG TCTACGGCCT GCCGGTGGAG
CTTGTGGCGG CGCCGCAAAA GACGGTCCTC GACGCGGTGA ACCGCCTCTA TGGCCGCCTC
GGGAGCACGG CCCAGGAGGT GGTGGAGGAA CTGGTTGGAG AAGACCTCTC TGTCATCGCC
ACCGAGCTCT CGGAACCCAA GGATCTCCTG GATCTGACCG ACGAGGCCCC GGTTATCCGG
CTCCTCAACT CCATCCTCTC CGAGGCGGTG AAGGAGCGGG CCAGCGACAT CCACATCGAG
CCCTACGAGC GGGAGCTGGA GGTCCGGTTC AGGATCGACG GCATCCTCTA CAAAAAGCTC
GCCCCCCCCA AGGTGGTGCA GGAGGCCCTT GCCTCCCGGG TGAAGATCAT GGCAGGCCTC
AACATCGCCG AAAAACGCCT CCCCCAGGAC GGCCGCATCC GGGTCATCGT GGCAGGGCGC
GACGTGGACA TCCGGGTCTC CATCATCCCC ACCTTTTTCG GCGAGCGGAC CGTGCTCCGG
CTCCTGGACA AGCAGAAGGG GATCATCTCC CTGGCCGACA TCGGCATGGA AGAGCGGGGG
GTCGCCGCCA TGGAGCGGCT CCTGTCACGC ACCAGCGGCA TCATCCTCGT CACCGGCCCC
ACGGGGAGCG GCAAGTCCAC CACCCTCTAC GCGGCCCTGA ACCGACTCAA CTCCCCCGAG
AAGAACATCA TCACCATCGA GGACCCCATC GAATACCAGA TCAAGGGGAT CGGCCAGATC
CAGGTGAACC CCAAGATCGA CCTCACCTTT GCCCAGGGGC TCCGGGCCAT CCTCCGCCAG
GACCCGGACA TCGTCATGGT GGGGGAGATC CGGGACGCCG AGACTGCGGA GATCGCCATG
CAGGCCTCCC TCACGGGGCA CCTGGTCCTC TCCACCCTCC ACACCAACGA TTCGGCCACG
GCCATCGCCC GGCTCGTGGA CATGGGGATC GAACCGTTCA TGGTGGCGTC GTCCCTTTCG
GCGGTCCTGG CCCAGCGTCT CGTGCGTCGC ATCTGCCCCC ACTGCCGGGA GCCCTATACG
CCCGAGCGCC AGTACGCCGG CATCACTCTC CCCGCCACCC TCTACCGGGG ACGGGGATGC
GAGAAGTGCT ACGGACTCGG CACCTGGGGA CGGGTCGGCA TCTACGAGCT CCTCCCCGTG
GACGGGGAGA TCTGTTCCAT GATCATCCGG CGGGAACCGG CGGGAACCAT CAAGGAGTAC
GCCGTCTCCC GCGGCATGCG GACCCTGCGG GATGATGGCC TTGCCAAGGC GGCGGCCGGC
ATCACCACCA TCGAGGAGGT TCTGCGGGTG ACCCAGGAGG AGTATGCCGA CCTTCCGGTA
TAG
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| Protein sequence | MTDTHDVERI AERLGIPFTA EIEEGEADLT LLARLPLAFA RGRLVLPLRE RDGRLMVAAG
NPADLAAVDE VRGVYGLPVE LVAAPQKTVL DAVNRLYGRL GSTAQEVVEE LVGEDLSVIA
TELSEPKDLL DLTDEAPVIR LLNSILSEAV KERASDIHIE PYERELEVRF RIDGILYKKL
APPKVVQEAL ASRVKIMAGL NIAEKRLPQD GRIRVIVAGR DVDIRVSIIP TFFGERTVLR
LLDKQKGIIS LADIGMEERG VAAMERLLSR TSGIILVTGP TGSGKSTTLY AALNRLNSPE
KNIITIEDPI EYQIKGIGQI QVNPKIDLTF AQGLRAILRQ DPDIVMVGEI RDAETAEIAM
QASLTGHLVL STLHTNDSAT AIARLVDMGI EPFMVASSLS AVLAQRLVRR ICPHCREPYT
PERQYAGITL PATLYRGRGC EKCYGLGTWG RVGIYELLPV DGEICSMIIR REPAGTIKEY
AVSRGMRTLR DDGLAKAAAG ITTIEEVLRV TQEEYADLPV
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