| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3364 |
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| Symbol | |
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| ID | 3739108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3779990 |
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| End bp | 3781900 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637780653 |
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| Product | type II and III secretion system protein:NolW-like |
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| Protein accession | YP_386301 |
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| Protein GI | 78224554 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000168391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0105147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATAC GCTTCTCAGC AGGGCTCGCC TCGGCGGCAC TTCTCCTCTC TCTCCTGGCC
CCCGTGCCAG CCATGGCCAA GGGGGTGGTT CTCAACTTCA GCGATGTGGA TATCGCCACC
ATGGTGAAGT TCATCAGCGA CCTCACCGGT AAGAACTTCG TCATGGACGA ACGGGTGAAG
GGGAAGATCT CGGTCTATTC CCCTTCGAAG CTCTCGTCCG ACGAAGCCTT CAACGTCTTC
ACATCAGTGC TGGAACTGAA GGGATTCACC ATCGTACCGG CAGGAAGGGT CTACAAGATC
ATCCCGACGT CCCAGGCGAA GCAGTCGGGG ATGAAGCTCC TCACGGAGAA GGACCGGGGA
CCGGTCAGCG ACGCCTACGT GGCCCGAATT ATTCCCCTCG AAAGAATCTC GGCCCAGGAG
GCGGTGACCT TTCTCCAGCC CATCGTTTCC AAGGATGGCT ACATCGCCGC CTTCGGCGCC
AACAACATGC TCATGGTGGT GGATTCGGCC CTGAACATCC AGAAGCTGAC CGGCATCCTC
GCCCAGGTTG ATTCGCTCCA GAAGCGCGAG GGAACCGAAA CCGTCTTCCT CAAGAACGCC
TCGGCGGAAA GCGTGGCAAC GGTGATCCGC GAATGGCTCG GCGGCAAGGG GAGCCGGCCG
GCCGCCGCTG GTCAGGGCGG GCAACAGACC ACCTCCGCCG CCGGCGTGCT CGTCATTCCC
GACAACCGAC TCAACGCCCT CGTCATCTCC GGCAACGACC GCGACAAGGA AGACATCAAG
AAGCTGGTCG CCCTGATAGA CGTCGTTCCC CCCACTTCGA GCAGCAAGAT CAACGTCTAC
TACCTGGAGA ATGCCGATGC CACCGAGGTG GGTAAAGTCC TCGACGGCAT CATCAAAGGT
GTCCCTCTCC CGGGCCAGCA GGGGGGAGCG CCCGCAACGG CCCCTGCCCA ATCCCCCTTC
GAGGGGGGCA AGATTTCCGT CACCCCCGAC AAGGCCACCA ACTCCCTGGT GATCATGGCC
TCGCCGGTCG ACTACCAGAA CCTCCTCCAG GTGATCCAGA AACTGGACAA GCGACGCCGC
CAGGTATTCG TACAGGCGGT CATTGCCGAA GTCTCCCTCG ACAAGGCGAA AGAACTGGGC
CTCCAGTTGG CCGTGAGCGG CGGAGGGACA GCCGGCAACA CGGCTGAGGC AGGGGTCTTC
GATCCCTTCA ACTTCGTGGG GGGGGCTTCT CCGCAACAGG CAGCAATCCT CAACGTACTC
ACCGGATTTG CCGGCTCAAG CAACCTGCAA CTGGGAGGGG TCCTCAAGGC TCTCATCTCC
AACGGCGCCG TGAACGTCCT CTCCACACCC AACATTCTGA CCTCCGACAA CAAGGAAGCC
GAGATCTTCG TGGGCGAGAA CGTGCCGTTT CTCACCCAGA CAAACCTCAC ATCCACGGGC
CTTTCCCAGC AGTCCATCGA GCGGAAGGAC ACCGGCATCA CGCTCCGGAT CACCCCCCAG
ATCAGCGAGG GGGAATTCGT GAAGCTCGAC ATCTACCAGG AGATCTCGGC CGTCAAGGAT
AGCGTCGGCC AGGCCAAGGA CCTGGTCACC ACCAAGCGCT CGGCCAAGAC CGCCGTGGTG
GTGAAGGACA AGGACACCGT GGTCATCGGC GGGCTCATCC AGGACCGCGA CACCGAAACA
ATCAACAAGA TCCCGATCCT CGGCGACATC CCGCTCCTGG GGTGGTTTTT CAAGACCAAA
TCGGCCCGGC GGGAAAAGAC CAATCTGATG ATCGTCCTCA CCCCGCGGAT TATCCGCGGT
GCCCAGGAAA TGGCTGAGGT GTCGAACCTT CAGAAGGGAA CGTTCGACAA CGCGGTGAGG
ATGGATATCC CCTTCAGCCT CGACCGGGAA GAACTGAAGA CGAAGCAATG A
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| Protein sequence | MIIRFSAGLA SAALLLSLLA PVPAMAKGVV LNFSDVDIAT MVKFISDLTG KNFVMDERVK
GKISVYSPSK LSSDEAFNVF TSVLELKGFT IVPAGRVYKI IPTSQAKQSG MKLLTEKDRG
PVSDAYVARI IPLERISAQE AVTFLQPIVS KDGYIAAFGA NNMLMVVDSA LNIQKLTGIL
AQVDSLQKRE GTETVFLKNA SAESVATVIR EWLGGKGSRP AAAGQGGQQT TSAAGVLVIP
DNRLNALVIS GNDRDKEDIK KLVALIDVVP PTSSSKINVY YLENADATEV GKVLDGIIKG
VPLPGQQGGA PATAPAQSPF EGGKISVTPD KATNSLVIMA SPVDYQNLLQ VIQKLDKRRR
QVFVQAVIAE VSLDKAKELG LQLAVSGGGT AGNTAEAGVF DPFNFVGGAS PQQAAILNVL
TGFAGSSNLQ LGGVLKALIS NGAVNVLSTP NILTSDNKEA EIFVGENVPF LTQTNLTSTG
LSQQSIERKD TGITLRITPQ ISEGEFVKLD IYQEISAVKD SVGQAKDLVT TKRSAKTAVV
VKDKDTVVIG GLIQDRDTET INKIPILGDI PLLGWFFKTK SARREKTNLM IVLTPRIIRG
AQEMAEVSNL QKGTFDNAVR MDIPFSLDRE ELKTKQ
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