| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3362 |
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| Symbol | |
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| ID | 3739106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3777508 |
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| End bp | 3778902 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637780651 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_386299 |
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| Protein GI | 78224552 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000016609 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00312332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACTGT CTTCACTGCG GTTTTTTAAA GAGATTGTCT TCGCTGCCTG TCTCGCAGTG
CTTGCGGTGG GAGAATCCCC TGCAAAGGTT TTGACGCCCG ATTTCGTCGA TCTCGCTGAG
AAGCTCAAGC CTACGGTCGT CAACATTAGT ACCACGAAGA CGTTAACGCC CCAGTTCCGA
ATGCGGCGCC AGCCATCTCC ATTCCCCGAC CCGTTTCAGG ACTTTTTCGA GCATTTTTTC
GAGGAAATGC CCCGCCGCCC CCAGCGTGAG CGGAGTCTCG GATCGGGCTT CATCATCAGC
AAGCAGGGGT TCATCATTAC CAATAATCAC GTCATTGCCG GGGCTGACGA GATCAAGGTC
CGCCTCTCCG ACGGCCGTGA ATTCAAGGCG GAGGTCAAAG GCTCCGATGA GAAGCTCGAT
TTAGCTCTTA TCAAGATTGA TGCCAAAGAG AATCTCCCCG TGGCTGAACT GGGGGACAGC
GCCCAGATCA AGGTGGGGGA ATGGGTCATG GCCATCGGCA ACCCCTTCGG CCTGGCTCAG
ACTGTTACCG CAGGGATTGT CAGCGCGACG GGGCGCGTTA TCGGCAGCGG CCCCTATGAC
GACTTCATCC AGACTGATGC CTCCATCAAT CCGGGGAATT CCGGTGGTCC CCTCTTCAAC
GCCGAAGGGA AGGTCATAGG GATCAACACC GCCATTGTGG CTGGCGGACA GGGGATCGGC
TTTGCCATTC CGGTCAATAT GGCCAAAGAT GTTCTTCCCC AGCTCGAAGA GAAAGGGAAG
GTGACGAGGG GATGGCTTGG CGTTACCATG CAGCCGATGT CACCGGAGTT GGCCAAGTCG
TTCGGCCTCG AAGGTGAAAA AGGAGCCCTC ATCACGGATG TTGTCAAGGA CGGGCCGGCG
GCCAACGCGG GGCTCAGGAG CGGCGACATA ATTCTGGAGT TCGATGGGAA AAAGATCAAT
GAGATGAGCG AGCTGCCGCG GCTGGTGGCT GCCGAGCCCA TTGGCAAGGC TGTCAAAATC
AAGGTTCTCC GGGAGGGGAA ACCCCGGGAA TTCACCGTTT CTGTCGGCCG GCTTGCCGAG
TCGGGCGACG AGAACAACCA GAAGACCGCC GGTGATGCGT TCGGCCTCTC TGCCCGGGAA
CTGACCAAGG ATCTCGCTGC ACGGTTGGGG CTGAAGGAGT CCCGGGGGGT GGTCGTCACC
GGTGTGAAGC AGGGGAGCAT TGCCGAGCTC GGAGGCTTCC AGTCAGGGGA CATAATACTC
GAGATTGGCG ACAAGGCGGT TGCGACTGTT ATGGATTACG AGAAGCTGAT CAAGGAATAC
GGGAAGGGTG ATGTTGTCCG CTTCCTGTTG CGTCGTGGAG ACTCCAACTA CTATCTGGCT
TTGCGAATAG AATAG
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| Protein sequence | MKLSSLRFFK EIVFAACLAV LAVGESPAKV LTPDFVDLAE KLKPTVVNIS TTKTLTPQFR
MRRQPSPFPD PFQDFFEHFF EEMPRRPQRE RSLGSGFIIS KQGFIITNNH VIAGADEIKV
RLSDGREFKA EVKGSDEKLD LALIKIDAKE NLPVAELGDS AQIKVGEWVM AIGNPFGLAQ
TVTAGIVSAT GRVIGSGPYD DFIQTDASIN PGNSGGPLFN AEGKVIGINT AIVAGGQGIG
FAIPVNMAKD VLPQLEEKGK VTRGWLGVTM QPMSPELAKS FGLEGEKGAL ITDVVKDGPA
ANAGLRSGDI ILEFDGKKIN EMSELPRLVA AEPIGKAVKI KVLREGKPRE FTVSVGRLAE
SGDENNQKTA GDAFGLSARE LTKDLAARLG LKESRGVVVT GVKQGSIAEL GGFQSGDIIL
EIGDKAVATV MDYEKLIKEY GKGDVVRFLL RRGDSNYYLA LRIE
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